Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 AC098934.4-201ENST00000564127 592 ntBASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCHD4Q6ZW05 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 MIR4758-201ENST00000577688 71 ntBASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
PTCHD4Q6ZW05 AC092368.3-202ENST00000574180 1591 ntBASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 AC097658.1-201ENST00000475555 843 ntBASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCHD4Q6ZW05 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
PTCHD4Q6ZW05 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTCHD4Q6ZW05 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.39■□□□□ 0.38
PTCHD4Q6ZW05 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.39■□□□□ 0.38
PTCHD4Q6ZW05 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.39■□□□□ 0.38
PTCHD4Q6ZW05 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 AC068880.1-201ENST00000507289 2297 ntBASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 AL138781.1-201ENST00000566567 1274 ntBASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 HLA-B-256ENST00000639848 1089 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms