Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.4□□□□□ -0.1
CDPF1Q6NVV7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
CDPF1Q6NVV7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
CDPF1Q6NVV7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.39□□□□□ -0.11
CDPF1Q6NVV7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 AC010525.1-201ENST00000585559 441 ntBASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 AC087239.1-201ENST00000622671 572 ntBASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 AC092437.1-201ENST00000624794 1048 ntBASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 AC093525.10-201ENST00000625130 1569 ntBASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDPF1Q6NVV7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDPF1Q6NVV7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDPF1Q6NVV7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.37□□□□□ -0.11
CDPF1Q6NVV7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CDPF1Q6NVV7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDPF1Q6NVV7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDPF1Q6NVV7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDPF1Q6NVV7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDPF1Q6NVV7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.37□□□□□ -0.11
CDPF1Q6NVV7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDPF1Q6NVV7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDPF1Q6NVV7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.37□□□□□ -0.11
CDPF1Q6NVV7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms