Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 MKRN4P-201ENST00000444706 1521 ntBASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00242Q5T6M2 AC067852.2-201ENST00000590513 2313 ntBASIC12.96□□□□□ -0.34
LINC00242Q5T6M2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00242Q5T6M2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00242Q5T6M2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00242Q5T6M2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
LINC00242Q5T6M2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00242Q5T6M2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
LINC00242Q5T6M2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00242Q5T6M2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00242Q5T6M2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00242Q5T6M2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 KRT18P16-201ENST00000510337 1294 ntBASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 FZD10-202ENST00000539839 3282 ntBASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00242Q5T6M2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 BX276092.2-201ENST00000417668 665 ntBASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 TUBB8P6-201ENST00000436895 1288 ntBASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 NME6-213ENST00000451657 871 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00242Q5T6M2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LINC00242Q5T6M2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms