Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.84■□□□□ 0.61
LDLRAP1Q5SW96 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LDLRAP1Q5SW96 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDLRAP1Q5SW96 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.84■□□□□ 0.61
LDLRAP1Q5SW96 IRX1P1-201ENST00000438849 1838 ntBASIC18.84■□□□□ 0.61
LDLRAP1Q5SW96 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LDLRAP1Q5SW96 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LDLRAP1Q5SW96 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.83■□□□□ 0.61
LDLRAP1Q5SW96 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.83■□□□□ 0.61
LDLRAP1Q5SW96 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LDLRAP1Q5SW96 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LDLRAP1Q5SW96 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LDLRAP1Q5SW96 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 CA15P1-201ENST00000481698 905 ntBASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 C2orf69P3-201ENST00000565542 1120 ntBASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 AC073912.3-201ENST00000624414 853 ntBASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 BX323043.1-201ENST00000641006 1765 ntBASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDLRAP1Q5SW96 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 AC004408.2-201ENST00000623613 2777 ntBASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LDLRAP1Q5SW96 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 NAPSB-206ENST00000562112 1266 ntBASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LDLRAP1Q5SW96 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.8■□□□□ 0.6
LDLRAP1Q5SW96 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms