Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.46■□□□□ 0.71
ALFQ53S48 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.46■□□□□ 0.71
ALFQ53S48 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.46■□□□□ 0.71
ALFQ53S48 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.46■□□□□ 0.71
ALFQ53S48 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.46■□□□□ 0.71
ALFQ53S48 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALFQ53S48 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALFQ53S48 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.46■□□□□ 0.71
ALFQ53S48 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALFQ53S48 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALFQ53S48 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.46■□□□□ 0.71
ALFQ53S48 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.46■□□□□ 0.71
ALFQ53S48 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALFQ53S48 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.46■□□□□ 0.71
ALFQ53S48 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.45■□□□□ 0.7
ALFQ53S48 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALFQ53S48 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.45■□□□□ 0.7
ALFQ53S48 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALFQ53S48 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALFQ53S48 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALFQ53S48 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.45■□□□□ 0.7
ALFQ53S48 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALFQ53S48 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALFQ53S48 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALFQ53S48 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.45■□□□□ 0.7
ALFQ53S48 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALFQ53S48 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALFQ53S48 SLC25A3P1-201ENST00000443844 931 ntBASIC19.45■□□□□ 0.7
ALFQ53S48 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.45■□□□□ 0.7
ALFQ53S48 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALFQ53S48 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
ALFQ53S48 MIR4674-201ENST00000582457 87 ntBASIC19.45■□□□□ 0.7
ALFQ53S48 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.45■□□□□ 0.7
ALFQ53S48 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.45■□□□□ 0.7
ALFQ53S48 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALFQ53S48 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALFQ53S48 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.44■□□□□ 0.7
ALFQ53S48 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.44■□□□□ 0.7
ALFQ53S48 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.44■□□□□ 0.7
ALFQ53S48 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.44■□□□□ 0.7
ALFQ53S48 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 AC005363.2-201ENST00000618631 242 ntBASIC19.44■□□□□ 0.7
ALFQ53S48 AC010653.2-201ENST00000623505 997 ntBASIC19.44■□□□□ 0.7
ALFQ53S48 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ALFQ53S48 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ALFQ53S48 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ALFQ53S48 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
ALFQ53S48 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ALFQ53S48 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.44■□□□□ 0.7
ALFQ53S48 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALFQ53S48 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ALFQ53S48 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.43■□□□□ 0.7
ALFQ53S48 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ALFQ53S48 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALFQ53S48 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALFQ53S48 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.43■□□□□ 0.7
ALFQ53S48 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ALFQ53S48 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALFQ53S48 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALFQ53S48 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALFQ53S48 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ALFQ53S48 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALFQ53S48 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ALFQ53S48 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.43■□□□□ 0.7
ALFQ53S48 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.43■□□□□ 0.7
ALFQ53S48 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.43■□□□□ 0.7
ALFQ53S48 AC010203.1-204ENST00000548782 407 ntBASIC19.43■□□□□ 0.7
ALFQ53S48 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ALFQ53S48 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
ALFQ53S48 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALFQ53S48 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.43■□□□□ 0.7
ALFQ53S48 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
ALFQ53S48 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ALFQ53S48 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALFQ53S48 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALFQ53S48 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALFQ53S48 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ALFQ53S48 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALFQ53S48 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms