Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2B3Q16720 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2B3Q16720 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP2B3Q16720 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2B3Q16720 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.2■■□□□ 1.3
ATP2B3Q16720 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ATP2B3Q16720 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2B3Q16720 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP2B3Q16720 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2B3Q16720 GUK1-204ENST00000366721 689 ntTSL 3 BASIC23.2■■□□□ 1.3
ATP2B3Q16720 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2B3Q16720 AL023284.2-201ENST00000405850 579 ntBASIC23.2■■□□□ 1.3
ATP2B3Q16720 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ATP2B3Q16720 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC23.2■■□□□ 1.3
ATP2B3Q16720 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2B3Q16720 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ATP2B3Q16720 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.2■■□□□ 1.3
ATP2B3Q16720 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
ATP2B3Q16720 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.2■■□□□ 1.3
ATP2B3Q16720 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP2B3Q16720 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
ATP2B3Q16720 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP2B3Q16720 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.19■■□□□ 1.3
ATP2B3Q16720 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
ATP2B3Q16720 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
ATP2B3Q16720 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
ATP2B3Q16720 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC23.19■■□□□ 1.3
ATP2B3Q16720 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
ATP2B3Q16720 AL032819.2-201ENST00000624543 2162 ntBASIC23.19■■□□□ 1.3
ATP2B3Q16720 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.19■■□□□ 1.3
ATP2B3Q16720 TSPY5P-201ENST00000426936 936 ntBASIC23.19■■□□□ 1.3
ATP2B3Q16720 AL441883.1-201ENST00000566170 1045 ntBASIC23.19■■□□□ 1.3
ATP2B3Q16720 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.19■■□□□ 1.3
ATP2B3Q16720 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.19■■□□□ 1.3
ATP2B3Q16720 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 FEM1AP3-201ENST00000403722 1741 ntBASIC23.19■■□□□ 1.3
ATP2B3Q16720 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATP2B3Q16720 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP2B3Q16720 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
ATP2B3Q16720 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
ATP2B3Q16720 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
ATP2B3Q16720 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.18■■□□□ 1.3
ATP2B3Q16720 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.18■■□□□ 1.3
ATP2B3Q16720 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP2B3Q16720 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.18■■□□□ 1.3
ATP2B3Q16720 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP2B3Q16720 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
ATP2B3Q16720 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
ATP2B3Q16720 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.18■■□□□ 1.3
ATP2B3Q16720 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATP2B3Q16720 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP2B3Q16720 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
ATP2B3Q16720 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ATP2B3Q16720 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2B3Q16720 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP2B3Q16720 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2B3Q16720 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2B3Q16720 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP2B3Q16720 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP2B3Q16720 FAM8A6P-201ENST00000407496 1135 ntBASIC23.17■■□□□ 1.3
ATP2B3Q16720 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP2B3Q16720 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP2B3Q16720 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2B3Q16720 AC140113.3-201ENST00000605663 199 ntBASIC23.17■■□□□ 1.3
ATP2B3Q16720 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
ATP2B3Q16720 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2B3Q16720 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP2B3Q16720 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.17■■□□□ 1.3
ATP2B3Q16720 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATP2B3Q16720 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.17■■□□□ 1.3
ATP2B3Q16720 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.17■■□□□ 1.3
ATP2B3Q16720 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms