Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EFNB3Q15768 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.14■□□□□ 0.17
EFNB3Q15768 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.14■□□□□ 0.17
EFNB3Q15768 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
EFNB3Q15768 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
EFNB3Q15768 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EFNB3Q15768 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.14■□□□□ 0.17
EFNB3Q15768 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
EFNB3Q15768 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
EFNB3Q15768 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
EFNB3Q15768 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 AC087289.5-201ENST00000586076 3175 ntBASIC16.13■□□□□ 0.17
EFNB3Q15768 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.13■□□□□ 0.17
EFNB3Q15768 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.13■□□□□ 0.17
EFNB3Q15768 AC092647.4-201ENST00000457211 535 ntBASIC16.13■□□□□ 0.17
EFNB3Q15768 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.13■□□□□ 0.17
EFNB3Q15768 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.13■□□□□ 0.17
EFNB3Q15768 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.13■□□□□ 0.17
EFNB3Q15768 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.13■□□□□ 0.17
EFNB3Q15768 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.13■□□□□ 0.17
EFNB3Q15768 AC087388.1-201ENST00000571370 1112 ntBASIC16.13■□□□□ 0.17
EFNB3Q15768 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
EFNB3Q15768 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
EFNB3Q15768 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
EFNB3Q15768 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
EFNB3Q15768 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.13■□□□□ 0.17
EFNB3Q15768 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.13■□□□□ 0.17
EFNB3Q15768 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
EFNB3Q15768 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.12■□□□□ 0.17
EFNB3Q15768 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
EFNB3Q15768 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
EFNB3Q15768 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.12■□□□□ 0.17
EFNB3Q15768 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.12■□□□□ 0.17
EFNB3Q15768 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
EFNB3Q15768 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.12■□□□□ 0.17
EFNB3Q15768 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.12■□□□□ 0.17
EFNB3Q15768 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.12■□□□□ 0.17
EFNB3Q15768 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.12■□□□□ 0.17
EFNB3Q15768 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.12■□□□□ 0.17
EFNB3Q15768 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.12■□□□□ 0.17
EFNB3Q15768 AC009947.2-201ENST00000444014 672 ntBASIC16.12■□□□□ 0.17
EFNB3Q15768 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.12■□□□□ 0.17
EFNB3Q15768 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.12■□□□□ 0.17
EFNB3Q15768 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.12■□□□□ 0.17
EFNB3Q15768 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.12■□□□□ 0.17
EFNB3Q15768 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.12■□□□□ 0.17
EFNB3Q15768 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
EFNB3Q15768 CR769767.2-201ENST00000622735 460 ntBASIC16.12■□□□□ 0.17
EFNB3Q15768 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
EFNB3Q15768 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.12■□□□□ 0.17
EFNB3Q15768 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
EFNB3Q15768 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.12■□□□□ 0.17
EFNB3Q15768 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EFNB3Q15768 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.12■□□□□ 0.17
EFNB3Q15768 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.12■□□□□ 0.17
EFNB3Q15768 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
EFNB3Q15768 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EFNB3Q15768 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFNB3Q15768 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFNB3Q15768 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.11■□□□□ 0.17
EFNB3Q15768 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.11■□□□□ 0.17
EFNB3Q15768 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.11■□□□□ 0.17
EFNB3Q15768 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFNB3Q15768 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFNB3Q15768 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFNB3Q15768 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFNB3Q15768 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
EFNB3Q15768 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.11■□□□□ 0.17
EFNB3Q15768 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.11■□□□□ 0.17
EFNB3Q15768 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EFNB3Q15768 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
EFNB3Q15768 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.11■□□□□ 0.17
EFNB3Q15768 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.11■□□□□ 0.17
EFNB3Q15768 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms