Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.4■□□□□ 0.7
GABPB1Q06547 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.4■□□□□ 0.7
GABPB1Q06547 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GABPB1Q06547 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GABPB1Q06547 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GABPB1Q06547 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
GABPB1Q06547 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GABPB1Q06547 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
GABPB1Q06547 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GABPB1Q06547 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
GABPB1Q06547 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABPB1Q06547 AC105020.1-201ENST00000435356 2205 ntBASIC19.39■□□□□ 0.69
GABPB1Q06547 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABPB1Q06547 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABPB1Q06547 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABPB1Q06547 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABPB1Q06547 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.39■□□□□ 0.69
GABPB1Q06547 KRT16P6-202ENST00000425692 1426 ntBASIC19.39■□□□□ 0.69
GABPB1Q06547 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GABPB1Q06547 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABPB1Q06547 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABPB1Q06547 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABPB1Q06547 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GABPB1Q06547 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABPB1Q06547 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
GABPB1Q06547 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABPB1Q06547 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABPB1Q06547 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABPB1Q06547 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
GABPB1Q06547 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABPB1Q06547 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GABPB1Q06547 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GABPB1Q06547 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
GABPB1Q06547 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABPB1Q06547 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABPB1Q06547 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.38■□□□□ 0.69
GABPB1Q06547 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABPB1Q06547 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GABPB1Q06547 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
GABPB1Q06547 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.38■□□□□ 0.69
GABPB1Q06547 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABPB1Q06547 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.38■□□□□ 0.69
GABPB1Q06547 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GABPB1Q06547 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GABPB1Q06547 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.38■□□□□ 0.69
GABPB1Q06547 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABPB1Q06547 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.38■□□□□ 0.69
GABPB1Q06547 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GABPB1Q06547 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.38■□□□□ 0.69
GABPB1Q06547 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.38■□□□□ 0.69
GABPB1Q06547 AC129492.7-201ENST00000622992 756 ntBASIC19.38■□□□□ 0.69
GABPB1Q06547 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GABPB1Q06547 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GABPB1Q06547 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABPB1Q06547 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
GABPB1Q06547 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.37■□□□□ 0.69
GABPB1Q06547 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GABPB1Q06547 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
GABPB1Q06547 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.37■□□□□ 0.69
GABPB1Q06547 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.37■□□□□ 0.69
GABPB1Q06547 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABPB1Q06547 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GABPB1Q06547 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.37■□□□□ 0.69
GABPB1Q06547 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABPB1Q06547 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.37■□□□□ 0.69
GABPB1Q06547 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABPB1Q06547 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.37■□□□□ 0.69
GABPB1Q06547 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABPB1Q06547 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
GABPB1Q06547 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
GABPB1Q06547 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GABPB1Q06547 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.37■□□□□ 0.69
GABPB1Q06547 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.37■□□□□ 0.69
GABPB1Q06547 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABPB1Q06547 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPB1Q06547 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.36■□□□□ 0.69
GABPB1Q06547 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
GABPB1Q06547 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPB1Q06547 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
GABPB1Q06547 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPB1Q06547 AC009237.3-201ENST00000393279 1427 ntBASIC19.36■□□□□ 0.69
GABPB1Q06547 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GABPB1Q06547 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.36■□□□□ 0.69
GABPB1Q06547 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.36■□□□□ 0.69
GABPB1Q06547 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPB1Q06547 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPB1Q06547 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPB1Q06547 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.36■□□□□ 0.69
GABPB1Q06547 SMUG1P1-201ENST00000590640 811 ntBASIC19.36■□□□□ 0.69
GABPB1Q06547 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.36■□□□□ 0.69
GABPB1Q06547 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPB1Q06547 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GABPB1Q06547 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.36■□□□□ 0.69
GABPB1Q06547 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.36■□□□□ 0.69
GABPB1Q06547 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GABPB1Q06547 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
GABPB1Q06547 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABPB1Q06547 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms