Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS1Q01581 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS1Q01581 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGCS1Q01581 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS1Q01581 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS1Q01581 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS1Q01581 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS1Q01581 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGCS1Q01581 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HMGCS1Q01581 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS1Q01581 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGCS1Q01581 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
HMGCS1Q01581 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.25■□□□□ 0.51
HMGCS1Q01581 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HMGCS1Q01581 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS1Q01581 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HMGCS1Q01581 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HMGCS1Q01581 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS1Q01581 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS1Q01581 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS1Q01581 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS1Q01581 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCS1Q01581 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGCS1Q01581 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HMGCS1Q01581 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HMGCS1Q01581 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGCS1Q01581 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HMGCS1Q01581 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.24■□□□□ 0.51
HMGCS1Q01581 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.24■□□□□ 0.51
HMGCS1Q01581 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 AC133681.1-201ENST00000465482 601 ntBASIC18.24■□□□□ 0.51
HMGCS1Q01581 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGCS1Q01581 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCS1Q01581 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCS1Q01581 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HMGCS1Q01581 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HMGCS1Q01581 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGCS1Q01581 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.24■□□□□ 0.51
HMGCS1Q01581 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCS1Q01581 ANO7L1-203ENST00000602586 1720 ntBASIC18.23■□□□□ 0.51
HMGCS1Q01581 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCS1Q01581 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCS1Q01581 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCS1Q01581 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCS1Q01581 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCS1Q01581 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCS1Q01581 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCS1Q01581 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCS1Q01581 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCS1Q01581 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCS1Q01581 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCS1Q01581 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGCS1Q01581 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGCS1Q01581 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGCS1Q01581 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS1Q01581 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS1Q01581 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS1Q01581 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS1Q01581 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS1Q01581 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS1Q01581 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS1Q01581 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGCS1Q01581 AC128676.1-201ENST00000454392 318 ntBASIC18.22■□□□□ 0.51
HMGCS1Q01581 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS1Q01581 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGCS1Q01581 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGCS1Q01581 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCS1Q01581 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGCS1Q01581 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms