Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.52■■□□□ 1.04
CCNA1P78396 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.52■■□□□ 1.04
CCNA1P78396 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.52■■□□□ 1.04
CCNA1P78396 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNA1P78396 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNA1P78396 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNA1P78396 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNA1P78396 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNA1P78396 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
CCNA1P78396 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCNA1P78396 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCNA1P78396 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CCNA1P78396 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNA1P78396 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CCNA1P78396 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.51■■□□□ 1.03
CCNA1P78396 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCNA1P78396 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 KRT18P23-201ENST00000435622 1283 ntBASIC21.51■■□□□ 1.03
CCNA1P78396 DRAXINP1-201ENST00000437611 948 ntBASIC21.51■■□□□ 1.03
CCNA1P78396 FDX1P1-201ENST00000449115 551 ntBASIC21.51■■□□□ 1.03
CCNA1P78396 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.51■■□□□ 1.03
CCNA1P78396 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.51■■□□□ 1.03
CCNA1P78396 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CCNA1P78396 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNA1P78396 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNA1P78396 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CCNA1P78396 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNA1P78396 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CCNA1P78396 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNA1P78396 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNA1P78396 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNA1P78396 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNA1P78396 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNA1P78396 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.5■■□□□ 1.03
CCNA1P78396 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CCNA1P78396 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNA1P78396 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.5■■□□□ 1.03
CCNA1P78396 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.5■■□□□ 1.03
CCNA1P78396 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.5■■□□□ 1.03
CCNA1P78396 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CCNA1P78396 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.5■■□□□ 1.03
CCNA1P78396 UNC93B7-201ENST00000509439 705 ntBASIC21.5■■□□□ 1.03
CCNA1P78396 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.5■■□□□ 1.03
CCNA1P78396 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.5■■□□□ 1.03
CCNA1P78396 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.5■■□□□ 1.03
CCNA1P78396 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCNA1P78396 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNA1P78396 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CCNA1P78396 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.5■■□□□ 1.03
CCNA1P78396 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNA1P78396 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNA1P78396 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.49■■□□□ 1.03
CCNA1P78396 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNA1P78396 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.49■■□□□ 1.03
CCNA1P78396 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CCNA1P78396 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CCNA1P78396 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCNA1P78396 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNA1P78396 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.49■■□□□ 1.03
CCNA1P78396 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CCNA1P78396 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNA1P78396 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.49■■□□□ 1.03
CCNA1P78396 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.49■■□□□ 1.03
CCNA1P78396 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.49■■□□□ 1.03
CCNA1P78396 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.49■■□□□ 1.03
CCNA1P78396 LINC01711-201ENST00000598340 967 ntBASIC21.49■■□□□ 1.03
CCNA1P78396 AL121772.3-201ENST00000610840 674 ntBASIC21.49■■□□□ 1.03
CCNA1P78396 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CCNA1P78396 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNA1P78396 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNA1P78396 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNA1P78396 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CCNA1P78396 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNA1P78396 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNA1P78396 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNA1P78396 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNA1P78396 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNA1P78396 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.48■■□□□ 1.03
CCNA1P78396 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNA1P78396 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNA1P78396 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
CCNA1P78396 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNA1P78396 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCNA1P78396 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CCNA1P78396 KRT8P10-201ENST00000450021 1447 ntBASIC21.48■■□□□ 1.03
CCNA1P78396 HOXB1-202ENST00000577092 1414 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms