Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.11■□□□□ 0.33
RPS4XP62701 AC133561.5-201ENST00000635547 218 ntBASIC17.11■□□□□ 0.33
RPS4XP62701 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4XP62701 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4XP62701 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4XP62701 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.11■□□□□ 0.33
RPS4XP62701 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS4XP62701 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.11■□□□□ 0.33
RPS4XP62701 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.1■□□□□ 0.33
RPS4XP62701 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.1■□□□□ 0.33
RPS4XP62701 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RPS4XP62701 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.1■□□□□ 0.33
RPS4XP62701 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RPS4XP62701 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.1■□□□□ 0.33
RPS4XP62701 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.1■□□□□ 0.33
RPS4XP62701 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.1■□□□□ 0.33
RPS4XP62701 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.1■□□□□ 0.33
RPS4XP62701 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.1■□□□□ 0.33
RPS4XP62701 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.1■□□□□ 0.33
RPS4XP62701 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.1■□□□□ 0.33
RPS4XP62701 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.1■□□□□ 0.33
RPS4XP62701 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RPS4XP62701 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS4XP62701 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RPS4XP62701 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.09■□□□□ 0.33
RPS4XP62701 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.09■□□□□ 0.33
RPS4XP62701 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 NIFKP9-201ENST00000419265 221 ntBASIC17.09■□□□□ 0.33
RPS4XP62701 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.09■□□□□ 0.33
RPS4XP62701 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.09■□□□□ 0.33
RPS4XP62701 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.09■□□□□ 0.33
RPS4XP62701 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.09■□□□□ 0.33
RPS4XP62701 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.09■□□□□ 0.33
RPS4XP62701 AL353708.3-201ENST00000610272 989 ntBASIC17.09■□□□□ 0.33
RPS4XP62701 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 HTR7P1-201ENST00000538670 1336 ntBASIC17.09■□□□□ 0.33
RPS4XP62701 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.09■□□□□ 0.33
RPS4XP62701 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RPS4XP62701 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.09■□□□□ 0.33
RPS4XP62701 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.09■□□□□ 0.33
RPS4XP62701 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RPS4XP62701 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.09■□□□□ 0.33
RPS4XP62701 AC009113.1-201ENST00000570267 2443 ntBASIC17.09■□□□□ 0.33
RPS4XP62701 NEFHP1-201ENST00000412845 2629 ntBASIC17.09■□□□□ 0.33
RPS4XP62701 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RPS4XP62701 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPS4XP62701 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPS4XP62701 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPS4XP62701 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPS4XP62701 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPS4XP62701 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RPS4XP62701 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RPS4XP62701 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4XP62701 ANO7L1-203ENST00000602586 1720 ntBASIC17.08■□□□□ 0.32
RPS4XP62701 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.08■□□□□ 0.32
RPS4XP62701 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4XP62701 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4XP62701 AC087499.1-201ENST00000418141 1075 ntBASIC17.08■□□□□ 0.32
RPS4XP62701 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.08■□□□□ 0.32
RPS4XP62701 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RPS4XP62701 KRT18P21-201ENST00000515767 1272 ntBASIC17.08■□□□□ 0.32
RPS4XP62701 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.08■□□□□ 0.32
RPS4XP62701 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.08■□□□□ 0.32
RPS4XP62701 AL355075.4-201ENST00000554988 638 ntBASIC17.08■□□□□ 0.32
RPS4XP62701 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.08■□□□□ 0.32
RPS4XP62701 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.08■□□□□ 0.32
RPS4XP62701 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.08■□□□□ 0.32
RPS4XP62701 AC026471.5-201ENST00000615068 467 ntBASIC17.08■□□□□ 0.32
RPS4XP62701 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPS4XP62701 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RPS4XP62701 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms