Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
USP46P62068 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
USP46P62068 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP46P62068 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
USP46P62068 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP46P62068 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP46P62068 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP46P62068 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.9■□□□□ 0.78
USP46P62068 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP46P62068 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP46P62068 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP46P62068 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP46P62068 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
USP46P62068 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
USP46P62068 ARMC10P1-201ENST00000313754 855 ntBASIC19.9■□□□□ 0.78
USP46P62068 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP46P62068 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
USP46P62068 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
USP46P62068 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.9■□□□□ 0.78
USP46P62068 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.9■□□□□ 0.78
USP46P62068 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
USP46P62068 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP46P62068 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.9■□□□□ 0.78
USP46P62068 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.9■□□□□ 0.78
USP46P62068 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.9■□□□□ 0.78
USP46P62068 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.9■□□□□ 0.78
USP46P62068 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.9■□□□□ 0.78
USP46P62068 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
USP46P62068 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
USP46P62068 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
USP46P62068 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.89■□□□□ 0.77
USP46P62068 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.89■□□□□ 0.77
USP46P62068 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.89■□□□□ 0.77
USP46P62068 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
USP46P62068 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP46P62068 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.89■□□□□ 0.77
USP46P62068 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.89■□□□□ 0.77
USP46P62068 COX11P1-201ENST00000489116 835 ntBASIC19.89■□□□□ 0.77
USP46P62068 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP46P62068 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP46P62068 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.89■□□□□ 0.77
USP46P62068 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.89■□□□□ 0.77
USP46P62068 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP46P62068 AC093484.2-201ENST00000580996 2166 ntBASIC19.89■□□□□ 0.77
USP46P62068 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.89■□□□□ 0.77
USP46P62068 AC011558.1-201ENST00000623459 338 ntBASIC19.89■□□□□ 0.77
USP46P62068 AL023973.1-201ENST00000624619 620 ntBASIC19.89■□□□□ 0.77
USP46P62068 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.89■□□□□ 0.77
USP46P62068 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
USP46P62068 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP46P62068 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
USP46P62068 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.88■□□□□ 0.77
USP46P62068 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
USP46P62068 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 GPAT2P1-201ENST00000444924 1672 ntBASIC19.88■□□□□ 0.77
USP46P62068 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
USP46P62068 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
USP46P62068 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.88■□□□□ 0.77
USP46P62068 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.88■□□□□ 0.77
USP46P62068 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
USP46P62068 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.88■□□□□ 0.77
USP46P62068 AC063952.2-201ENST00000498792 1227 ntBASIC19.88■□□□□ 0.77
USP46P62068 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.88■□□□□ 0.77
USP46P62068 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.88■□□□□ 0.77
USP46P62068 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.88■□□□□ 0.77
USP46P62068 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.88■□□□□ 0.77
USP46P62068 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
USP46P62068 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP46P62068 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.87■□□□□ 0.77
USP46P62068 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
USP46P62068 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.87■□□□□ 0.77
USP46P62068 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.87■□□□□ 0.77
USP46P62068 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
USP46P62068 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.87■□□□□ 0.77
USP46P62068 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.87■□□□□ 0.77
USP46P62068 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms