Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.23□□□□□ -0.29
CKS1BP61024 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.23□□□□□ -0.29
CKS1BP61024 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.23□□□□□ -0.29
CKS1BP61024 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.23□□□□□ -0.29
CKS1BP61024 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
CKS1BP61024 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CKS1BP61024 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
CKS1BP61024 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CKS1BP61024 AC009237.14-201ENST00000609975 1594 ntBASIC13.23□□□□□ -0.29
CKS1BP61024 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CKS1BP61024 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CKS1BP61024 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CKS1BP61024 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.22□□□□□ -0.29
CKS1BP61024 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.22□□□□□ -0.29
CKS1BP61024 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
CKS1BP61024 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CKS1BP61024 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.22□□□□□ -0.29
CKS1BP61024 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CKS1BP61024 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CKS1BP61024 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.22□□□□□ -0.29
CKS1BP61024 YBX1P1-201ENST00000445822 960 ntBASIC13.22□□□□□ -0.29
CKS1BP61024 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.22□□□□□ -0.29
CKS1BP61024 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.22□□□□□ -0.29
CKS1BP61024 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 AL591742.1-201ENST00000604433 565 ntBASIC13.22□□□□□ -0.29
CKS1BP61024 AC005837.3-201ENST00000612163 286 ntBASIC13.22□□□□□ -0.29
CKS1BP61024 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.22□□□□□ -0.29
CKS1BP61024 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.22□□□□□ -0.29
CKS1BP61024 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CKS1BP61024 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.22□□□□□ -0.29
CKS1BP61024 Z82202.1-201ENST00000623446 1880 ntBASIC13.22□□□□□ -0.29
CKS1BP61024 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.22□□□□□ -0.29
CKS1BP61024 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.22□□□□□ -0.29
CKS1BP61024 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.22□□□□□ -0.29
CKS1BP61024 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CKS1BP61024 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CKS1BP61024 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.22□□□□□ -0.29
CKS1BP61024 AC004854.2-201ENST00000608450 1441 ntBASIC13.22□□□□□ -0.29
CKS1BP61024 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CKS1BP61024 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.22□□□□□ -0.29
CKS1BP61024 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CKS1BP61024 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.21□□□□□ -0.29
CKS1BP61024 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS1BP61024 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS1BP61024 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.21□□□□□ -0.29
CKS1BP61024 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.21□□□□□ -0.29
CKS1BP61024 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS1BP61024 KRT18P14-201ENST00000534205 1250 ntBASIC13.21□□□□□ -0.29
CKS1BP61024 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.21□□□□□ -0.29
CKS1BP61024 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.21□□□□□ -0.29
CKS1BP61024 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.21□□□□□ -0.29
CKS1BP61024 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CKS1BP61024 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS1BP61024 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms