Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.55■□□□□ 0.72
EIF3EP60228 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.55■□□□□ 0.72
EIF3EP60228 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
EIF3EP60228 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 NIFKP9-201ENST00000419265 221 ntBASIC19.54■□□□□ 0.72
EIF3EP60228 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.54■□□□□ 0.72
EIF3EP60228 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.54■□□□□ 0.72
EIF3EP60228 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
EIF3EP60228 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.54■□□□□ 0.72
EIF3EP60228 MIR4651-201ENST00000582622 73 ntBASIC19.54■□□□□ 0.72
EIF3EP60228 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.54■□□□□ 0.72
EIF3EP60228 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
EIF3EP60228 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EIF3EP60228 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
EIF3EP60228 ANO7L1-203ENST00000602586 1720 ntBASIC19.54■□□□□ 0.72
EIF3EP60228 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
EIF3EP60228 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3EP60228 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
EIF3EP60228 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.53■□□□□ 0.72
EIF3EP60228 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3EP60228 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3EP60228 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
EIF3EP60228 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.53■□□□□ 0.72
EIF3EP60228 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.53■□□□□ 0.72
EIF3EP60228 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
EIF3EP60228 AP002982.1-201ENST00000492365 877 ntBASIC19.53■□□□□ 0.72
EIF3EP60228 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3EP60228 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.53■□□□□ 0.72
EIF3EP60228 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.53■□□□□ 0.72
EIF3EP60228 C1QBPP2-201ENST00000528754 825 ntBASIC19.53■□□□□ 0.72
EIF3EP60228 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.53■□□□□ 0.72
EIF3EP60228 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3EP60228 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3EP60228 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3EP60228 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.53■□□□□ 0.72
EIF3EP60228 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3EP60228 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.53■□□□□ 0.72
EIF3EP60228 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3EP60228 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3EP60228 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
EIF3EP60228 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.53■□□□□ 0.72
EIF3EP60228 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3EP60228 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.52■□□□□ 0.72
EIF3EP60228 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.52■□□□□ 0.72
EIF3EP60228 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 HTR7P1-201ENST00000538670 1336 ntBASIC19.52■□□□□ 0.72
EIF3EP60228 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.52■□□□□ 0.72
EIF3EP60228 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.52■□□□□ 0.72
EIF3EP60228 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
EIF3EP60228 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.52■□□□□ 0.72
EIF3EP60228 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.52■□□□□ 0.72
EIF3EP60228 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
EIF3EP60228 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.52■□□□□ 0.72
EIF3EP60228 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.52■□□□□ 0.72
EIF3EP60228 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
EIF3EP60228 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.52■□□□□ 0.72
EIF3EP60228 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
EIF3EP60228 POU5F1P3-201ENST00000428824 1078 ntBASIC19.52■□□□□ 0.72
EIF3EP60228 AC004980.1-204ENST00000429707 299 ntBASIC19.52■□□□□ 0.72
EIF3EP60228 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.52■□□□□ 0.72
EIF3EP60228 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.52■□□□□ 0.72
EIF3EP60228 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.52■□□□□ 0.72
EIF3EP60228 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
EIF3EP60228 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.52■□□□□ 0.72
EIF3EP60228 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
EIF3EP60228 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3EP60228 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.52■□□□□ 0.71
EIF3EP60228 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
EIF3EP60228 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
EIF3EP60228 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
EIF3EP60228 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms