Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
NR1H2P55055 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.91■□□□□ 0.46
NR1H2P55055 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NR1H2P55055 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NR1H2P55055 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NR1H2P55055 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
NR1H2P55055 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.91■□□□□ 0.46
NR1H2P55055 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NR1H2P55055 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NR1H2P55055 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
NR1H2P55055 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NR1H2P55055 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.91■□□□□ 0.46
NR1H2P55055 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 AC141586.5-201ENST00000624546 2050 ntBASIC17.91■□□□□ 0.46
NR1H2P55055 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.9■□□□□ 0.46
NR1H2P55055 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H2P55055 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.9■□□□□ 0.46
NR1H2P55055 AC124067.4-201ENST00000519691 2379 ntBASIC17.9■□□□□ 0.46
NR1H2P55055 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.9■□□□□ 0.46
NR1H2P55055 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H2P55055 FP475955.4-201ENST00000623131 1990 ntBASIC17.9■□□□□ 0.46
NR1H2P55055 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H2P55055 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H2P55055 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H2P55055 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NR1H2P55055 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.9■□□□□ 0.46
NR1H2P55055 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.9■□□□□ 0.46
NR1H2P55055 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.9■□□□□ 0.46
NR1H2P55055 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.9■□□□□ 0.46
NR1H2P55055 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.9■□□□□ 0.46
NR1H2P55055 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
NR1H2P55055 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.9■□□□□ 0.46
NR1H2P55055 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H2P55055 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H2P55055 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.9■□□□□ 0.46
NR1H2P55055 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H2P55055 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H2P55055 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.9■□□□□ 0.46
NR1H2P55055 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.9■□□□□ 0.46
NR1H2P55055 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NR1H2P55055 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H2P55055 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H2P55055 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.9■□□□□ 0.46
NR1H2P55055 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NR1H2P55055 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.89■□□□□ 0.46
NR1H2P55055 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NR1H2P55055 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NR1H2P55055 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
NR1H2P55055 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 TNRC18P3-201ENST00000441896 2691 ntBASIC17.89■□□□□ 0.45
NR1H2P55055 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.89■□□□□ 0.45
NR1H2P55055 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NR1H2P55055 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NR1H2P55055 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.89■□□□□ 0.45
NR1H2P55055 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.89■□□□□ 0.45
NR1H2P55055 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.89■□□□□ 0.45
NR1H2P55055 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
NR1H2P55055 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.89■□□□□ 0.45
NR1H2P55055 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR1H2P55055 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NR1H2P55055 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
NR1H2P55055 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
NR1H2P55055 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H2P55055 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H2P55055 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H2P55055 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR1H2P55055 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms