Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AP000550.4-202ENST00000639755 178 ntBASIC19.3■□□□□ 0.68
ATXN3P54252 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATXN3P54252 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATXN3P54252 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.3■□□□□ 0.68
ATXN3P54252 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATXN3P54252 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ATXN3P54252 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATXN3P54252 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.3■□□□□ 0.68
ATXN3P54252 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ATXN3P54252 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 KRT16P6-202ENST00000425692 1426 ntBASIC19.29■□□□□ 0.68
ATXN3P54252 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.29■□□□□ 0.68
ATXN3P54252 TSPY5P-201ENST00000426936 936 ntBASIC19.29■□□□□ 0.68
ATXN3P54252 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.29■□□□□ 0.68
ATXN3P54252 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.29■□□□□ 0.68
ATXN3P54252 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.29■□□□□ 0.68
ATXN3P54252 COX11P1-201ENST00000489116 835 ntBASIC19.29■□□□□ 0.68
ATXN3P54252 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ATXN3P54252 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.29■□□□□ 0.68
ATXN3P54252 AC130371.2-201ENST00000619443 611 ntBASIC19.29■□□□□ 0.68
ATXN3P54252 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.29■□□□□ 0.68
ATXN3P54252 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.29■□□□□ 0.68
ATXN3P54252 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.29■□□□□ 0.68
ATXN3P54252 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ATXN3P54252 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATXN3P54252 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.28■□□□□ 0.68
ATXN3P54252 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ATXN3P54252 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
ATXN3P54252 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.28■□□□□ 0.68
ATXN3P54252 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ATXN3P54252 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.28■□□□□ 0.68
ATXN3P54252 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
ATXN3P54252 AL031133.1-201ENST00000406807 723 ntBASIC19.28■□□□□ 0.68
ATXN3P54252 AC004951.3-201ENST00000418645 1148 ntBASIC19.28■□□□□ 0.68
ATXN3P54252 MFAP1P1-201ENST00000442257 1255 ntBASIC19.28■□□□□ 0.68
ATXN3P54252 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.28■□□□□ 0.68
ATXN3P54252 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
ATXN3P54252 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.28■□□□□ 0.68
ATXN3P54252 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATXN3P54252 AC116351.2-201ENST00000606540 1585 ntBASIC19.27■□□□□ 0.68
ATXN3P54252 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.27■□□□□ 0.68
ATXN3P54252 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.27■□□□□ 0.68
ATXN3P54252 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATXN3P54252 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.27■□□□□ 0.68
ATXN3P54252 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.27■□□□□ 0.68
ATXN3P54252 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.27■□□□□ 0.68
ATXN3P54252 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATXN3P54252 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.27■□□□□ 0.68
ATXN3P54252 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATXN3P54252 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATXN3P54252 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.27■□□□□ 0.68
ATXN3P54252 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATXN3P54252 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATXN3P54252 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATXN3P54252 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATXN3P54252 KRT18P48-201ENST00000434763 852 ntBASIC19.27■□□□□ 0.68
ATXN3P54252 AC091390.4-202ENST00000476426 537 ntBASIC19.27■□□□□ 0.68
ATXN3P54252 YBX1P2-201ENST00000489612 999 ntBASIC19.27■□□□□ 0.68
ATXN3P54252 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.27■□□□□ 0.68
ATXN3P54252 KRT18P16-201ENST00000510337 1294 ntBASIC19.27■□□□□ 0.68
ATXN3P54252 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.27■□□□□ 0.68
ATXN3P54252 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.27■□□□□ 0.68
ATXN3P54252 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.27■□□□□ 0.68
ATXN3P54252 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
ATXN3P54252 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms