Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCNKAP51800 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLCNKAP51800 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCNKAP51800 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLCNKAP51800 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCNKAP51800 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCNKAP51800 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCNKAP51800 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCNKAP51800 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCNKAP51800 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCNKAP51800 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCNKAP51800 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCNKAP51800 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.55■□□□□ 0.56
CLCNKAP51800 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
CLCNKAP51800 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCNKAP51800 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCNKAP51800 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCNKAP51800 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCNKAP51800 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLCNKAP51800 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCNKAP51800 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCNKAP51800 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CLCNKAP51800 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CLCNKAP51800 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCNKAP51800 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCNKAP51800 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCNKAP51800 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLCNKAP51800 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLCNKAP51800 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLCNKAP51800 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCNKAP51800 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCNKAP51800 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCNKAP51800 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCNKAP51800 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCNKAP51800 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCNKAP51800 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CLCNKAP51800 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCNKAP51800 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CLCNKAP51800 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLCNKAP51800 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.54■□□□□ 0.56
CLCNKAP51800 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCNKAP51800 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCNKAP51800 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCNKAP51800 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCNKAP51800 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.54■□□□□ 0.56
CLCNKAP51800 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
CLCNKAP51800 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCNKAP51800 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCNKAP51800 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLCNKAP51800 FEM1AP3-201ENST00000403722 1741 ntBASIC18.54■□□□□ 0.56
CLCNKAP51800 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLCNKAP51800 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCNKAP51800 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCNKAP51800 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCNKAP51800 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCNKAP51800 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCNKAP51800 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCNKAP51800 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.53■□□□□ 0.56
CLCNKAP51800 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCNKAP51800 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCNKAP51800 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CLCNKAP51800 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCNKAP51800 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCNKAP51800 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CLCNKAP51800 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CLCNKAP51800 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCNKAP51800 MIR1224-201ENST00000408193 85 ntBASIC18.53■□□□□ 0.56
CLCNKAP51800 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.53■□□□□ 0.56
CLCNKAP51800 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCNKAP51800 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCNKAP51800 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCNKAP51800 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.53■□□□□ 0.56
CLCNKAP51800 AC141257.4-201ENST00000634557 245 ntBASIC18.53■□□□□ 0.56
CLCNKAP51800 AC136944.6-201ENST00000634818 245 ntBASIC18.53■□□□□ 0.56
CLCNKAP51800 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.53■□□□□ 0.56
CLCNKAP51800 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.53■□□□□ 0.56
CLCNKAP51800 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCNKAP51800 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.53■□□□□ 0.56
CLCNKAP51800 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.53■□□□□ 0.56
CLCNKAP51800 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCNKAP51800 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCNKAP51800 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.53■□□□□ 0.56
CLCNKAP51800 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLCNKAP51800 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCNKAP51800 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCNKAP51800 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.52■□□□□ 0.56
CLCNKAP51800 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCNKAP51800 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCNKAP51800 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.52■□□□□ 0.56
CLCNKAP51800 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLCNKAP51800 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.52■□□□□ 0.56
CLCNKAP51800 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLCNKAP51800 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCNKAP51800 FP475955.4-201ENST00000623131 1990 ntBASIC18.52■□□□□ 0.56
CLCNKAP51800 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.52■□□□□ 0.56
CLCNKAP51800 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLCNKAP51800 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCNKAP51800 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCNKAP51800 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLCNKAP51800 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms