Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC3P51654 AL031432.5-201ENST00000641059 760 ntBASIC20.9■□□□□ 0.94
GPC3P51654 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GPC3P51654 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC3P51654 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.9■□□□□ 0.94
GPC3P51654 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GPC3P51654 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GPC3P51654 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
GPC3P51654 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GPC3P51654 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
GPC3P51654 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GPC3P51654 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC3P51654 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC3P51654 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC3P51654 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.89■□□□□ 0.93
GPC3P51654 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC3P51654 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.89■□□□□ 0.93
GPC3P51654 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GPC3P51654 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.89■□□□□ 0.93
GPC3P51654 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GPC3P51654 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.89■□□□□ 0.93
GPC3P51654 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.89■□□□□ 0.93
GPC3P51654 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.89■□□□□ 0.93
GPC3P51654 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.89■□□□□ 0.93
GPC3P51654 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GPC3P51654 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.89■□□□□ 0.93
GPC3P51654 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC3P51654 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC3P51654 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GPC3P51654 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC3P51654 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC3P51654 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GPC3P51654 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
GPC3P51654 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
GPC3P51654 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.88■□□□□ 0.93
GPC3P51654 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GPC3P51654 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.88■□□□□ 0.93
GPC3P51654 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
GPC3P51654 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
GPC3P51654 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.88■□□□□ 0.93
GPC3P51654 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.88■□□□□ 0.93
GPC3P51654 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.88■□□□□ 0.93
GPC3P51654 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.88■□□□□ 0.93
GPC3P51654 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.88■□□□□ 0.93
GPC3P51654 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.88■□□□□ 0.93
GPC3P51654 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.88■□□□□ 0.93
GPC3P51654 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC3P51654 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC3P51654 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
GPC3P51654 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
GPC3P51654 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC3P51654 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
GPC3P51654 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.87■□□□□ 0.93
GPC3P51654 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GPC3P51654 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC3P51654 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.87■□□□□ 0.93
GPC3P51654 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GPC3P51654 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.87■□□□□ 0.93
GPC3P51654 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC3P51654 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC3P51654 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
GPC3P51654 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC3P51654 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.87■□□□□ 0.93
GPC3P51654 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
GPC3P51654 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC3P51654 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.87■□□□□ 0.93
GPC3P51654 AC009947.2-201ENST00000444014 672 ntBASIC20.87■□□□□ 0.93
GPC3P51654 AC092647.4-201ENST00000457211 535 ntBASIC20.87■□□□□ 0.93
GPC3P51654 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.87■□□□□ 0.93
GPC3P51654 AC140113.3-201ENST00000605663 199 ntBASIC20.87■□□□□ 0.93
GPC3P51654 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.87■□□□□ 0.93
GPC3P51654 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC3P51654 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC3P51654 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.87■□□□□ 0.93
GPC3P51654 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
GPC3P51654 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC3P51654 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC3P51654 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
GPC3P51654 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC3P51654 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.86■□□□□ 0.93
GPC3P51654 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.86■□□□□ 0.93
GPC3P51654 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.86■□□□□ 0.93
GPC3P51654 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.86■□□□□ 0.93
GPC3P51654 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.86■□□□□ 0.93
GPC3P51654 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.86■□□□□ 0.93
GPC3P51654 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.86■□□□□ 0.93
GPC3P51654 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
GPC3P51654 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms