Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR4P51571 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.37■□□□□ 0.37
SSR4P51571 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SSR4P51571 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.37■□□□□ 0.37
SSR4P51571 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.37■□□□□ 0.37
SSR4P51571 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 GPAT2P1-201ENST00000444924 1672 ntBASIC17.37■□□□□ 0.37
SSR4P51571 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SSR4P51571 RNF152P1-201ENST00000397754 604 ntBASIC17.37■□□□□ 0.37
SSR4P51571 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SSR4P51571 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.37■□□□□ 0.37
SSR4P51571 MCCD1P1-208ENST00000445732 328 ntBASIC17.37■□□□□ 0.37
SSR4P51571 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.37■□□□□ 0.37
SSR4P51571 YBX1P2-201ENST00000489612 999 ntBASIC17.37■□□□□ 0.37
SSR4P51571 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.37■□□□□ 0.37
SSR4P51571 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.37■□□□□ 0.37
SSR4P51571 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.37■□□□□ 0.37
SSR4P51571 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.37■□□□□ 0.37
SSR4P51571 FP475955.4-201ENST00000623131 1990 ntBASIC17.37■□□□□ 0.37
SSR4P51571 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSR4P51571 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.37■□□□□ 0.37
SSR4P51571 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.36■□□□□ 0.37
SSR4P51571 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SSR4P51571 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.36■□□□□ 0.37
SSR4P51571 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SSR4P51571 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
SSR4P51571 ARMC10P1-201ENST00000313754 855 ntBASIC17.36■□□□□ 0.37
SSR4P51571 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.36■□□□□ 0.37
SSR4P51571 AL023284.2-201ENST00000405850 579 ntBASIC17.36■□□□□ 0.37
SSR4P51571 AC009947.2-201ENST00000444014 672 ntBASIC17.36■□□□□ 0.37
SSR4P51571 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SSR4P51571 KRT18P35-201ENST00000510488 1269 ntBASIC17.36■□□□□ 0.37
SSR4P51571 AL445228.2-201ENST00000605589 952 ntBASIC17.36■□□□□ 0.37
SSR4P51571 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 CR769767.2-201ENST00000622735 460 ntBASIC17.36■□□□□ 0.37
SSR4P51571 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SSR4P51571 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SSR4P51571 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.36■□□□□ 0.37
SSR4P51571 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SSR4P51571 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.36■□□□□ 0.37
SSR4P51571 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SSR4P51571 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.36■□□□□ 0.37
SSR4P51571 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR4P51571 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SSR4P51571 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR4P51571 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.35■□□□□ 0.37
SSR4P51571 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.35■□□□□ 0.37
SSR4P51571 AC007952.6-201ENST00000573168 2673 ntBASIC17.35■□□□□ 0.37
SSR4P51571 AC003957.1-201ENST00000625108 2673 ntBASIC17.35■□□□□ 0.37
SSR4P51571 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SSR4P51571 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.35■□□□□ 0.37
SSR4P51571 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSR4P51571 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR4P51571 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR4P51571 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.35■□□□□ 0.37
SSR4P51571 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.35■□□□□ 0.37
SSR4P51571 AC092647.4-201ENST00000457211 535 ntBASIC17.35■□□□□ 0.37
SSR4P51571 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.35■□□□□ 0.37
SSR4P51571 NEK4P2-201ENST00000580004 1012 ntBASIC17.35■□□□□ 0.37
SSR4P51571 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSR4P51571 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SSR4P51571 AL023973.1-201ENST00000624619 620 ntBASIC17.35■□□□□ 0.37
SSR4P51571 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SSR4P51571 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR4P51571 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR4P51571 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.35■□□□□ 0.37
SSR4P51571 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSR4P51571 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SSR4P51571 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.35■□□□□ 0.37
SSR4P51571 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SSR4P51571 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR4P51571 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms