Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GSK3AP49840 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.52■□□□□ 0.24
GSK3AP49840 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GSK3AP49840 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
GSK3AP49840 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.52■□□□□ 0.24
GSK3AP49840 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GSK3AP49840 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GSK3AP49840 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
GSK3AP49840 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
GSK3AP49840 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
GSK3AP49840 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
GSK3AP49840 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GSK3AP49840 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GSK3AP49840 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GSK3AP49840 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.52■□□□□ 0.23
GSK3AP49840 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GSK3AP49840 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 AC090164.3-201ENST00000610780 2143 ntBASIC16.51■□□□□ 0.23
GSK3AP49840 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
GSK3AP49840 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.51■□□□□ 0.23
GSK3AP49840 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.51■□□□□ 0.23
GSK3AP49840 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.51■□□□□ 0.23
GSK3AP49840 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.51■□□□□ 0.23
GSK3AP49840 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.51■□□□□ 0.23
GSK3AP49840 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.51■□□□□ 0.23
GSK3AP49840 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.51■□□□□ 0.23
GSK3AP49840 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GSK3AP49840 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GSK3AP49840 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.51■□□□□ 0.23
GSK3AP49840 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.51■□□□□ 0.23
GSK3AP49840 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.5■□□□□ 0.23
GSK3AP49840 FEM1AP3-201ENST00000403722 1741 ntBASIC16.5■□□□□ 0.23
GSK3AP49840 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
GSK3AP49840 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.5■□□□□ 0.23
GSK3AP49840 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GSK3AP49840 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.5■□□□□ 0.23
GSK3AP49840 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.5■□□□□ 0.23
GSK3AP49840 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
GSK3AP49840 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.5■□□□□ 0.23
GSK3AP49840 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.5■□□□□ 0.23
GSK3AP49840 TSPY21P-201ENST00000433481 731 ntBASIC16.5■□□□□ 0.23
GSK3AP49840 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
GSK3AP49840 C1QBPP2-201ENST00000528754 825 ntBASIC16.5■□□□□ 0.23
GSK3AP49840 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.5■□□□□ 0.23
GSK3AP49840 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.5■□□□□ 0.23
GSK3AP49840 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.5■□□□□ 0.23
GSK3AP49840 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.5■□□□□ 0.23
GSK3AP49840 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GSK3AP49840 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.5■□□□□ 0.23
GSK3AP49840 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GSK3AP49840 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GSK3AP49840 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.49■□□□□ 0.23
GSK3AP49840 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.49■□□□□ 0.23
GSK3AP49840 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GSK3AP49840 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GSK3AP49840 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
GSK3AP49840 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GSK3AP49840 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.49■□□□□ 0.23
GSK3AP49840 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GSK3AP49840 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GSK3AP49840 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GSK3AP49840 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.49■□□□□ 0.23
GSK3AP49840 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
GSK3AP49840 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.49■□□□□ 0.23
GSK3AP49840 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.49■□□□□ 0.23
GSK3AP49840 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.49■□□□□ 0.23
GSK3AP49840 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.49■□□□□ 0.23
GSK3AP49840 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms