Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.62■■□□□ 1.05
TM4SF4P48230 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.62■■□□□ 1.05
TM4SF4P48230 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.62■■□□□ 1.05
TM4SF4P48230 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.62■■□□□ 1.05
TM4SF4P48230 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.62■■□□□ 1.05
TM4SF4P48230 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.62■■□□□ 1.05
TM4SF4P48230 AL049840.3-201ENST00000602669 611 ntBASIC21.62■■□□□ 1.05
TM4SF4P48230 AL139424.1-201ENST00000607572 797 ntBASIC21.62■■□□□ 1.05
TM4SF4P48230 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
TM4SF4P48230 AC133561.1-201ENST00000568600 2415 ntBASIC21.62■■□□□ 1.05
TM4SF4P48230 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
TM4SF4P48230 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.62■■□□□ 1.05
TM4SF4P48230 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TM4SF4P48230 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM4SF4P48230 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM4SF4P48230 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM4SF4P48230 EP400NL-214ENST00000641289 2402 ntBASIC21.61■■□□□ 1.05
TM4SF4P48230 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TM4SF4P48230 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM4SF4P48230 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TM4SF4P48230 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TM4SF4P48230 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.61■■□□□ 1.05
TM4SF4P48230 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM4SF4P48230 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM4SF4P48230 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
TM4SF4P48230 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.61■■□□□ 1.05
TM4SF4P48230 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TM4SF4P48230 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.61■■□□□ 1.05
TM4SF4P48230 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.61■■□□□ 1.05
TM4SF4P48230 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM4SF4P48230 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.61■■□□□ 1.05
TM4SF4P48230 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.61■■□□□ 1.05
TM4SF4P48230 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.61■■□□□ 1.05
TM4SF4P48230 MIR7706-201ENST00000613747 67 ntBASIC21.61■■□□□ 1.05
TM4SF4P48230 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM4SF4P48230 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM4SF4P48230 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM4SF4P48230 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.61■■□□□ 1.05
TM4SF4P48230 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.61■■□□□ 1.05
TM4SF4P48230 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TM4SF4P48230 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.6■■□□□ 1.05
TM4SF4P48230 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
TM4SF4P48230 AC011840.4-201ENST00000578471 627 ntBASIC21.6■■□□□ 1.05
TM4SF4P48230 MIR3180-4-201ENST00000582223 153 ntBASIC21.6■■□□□ 1.05
TM4SF4P48230 AC024563.2-201ENST00000603282 481 ntBASIC21.6■■□□□ 1.05
TM4SF4P48230 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.6■■□□□ 1.05
TM4SF4P48230 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 SDHAP1-207ENST00000440850 2000 ntBASIC21.6■■□□□ 1.05
TM4SF4P48230 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF4P48230 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF4P48230 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TM4SF4P48230 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TM4SF4P48230 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.59■■□□□ 1.05
TM4SF4P48230 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TM4SF4P48230 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF4P48230 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.59■■□□□ 1.05
TM4SF4P48230 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF4P48230 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF4P48230 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF4P48230 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.59■■□□□ 1.05
TM4SF4P48230 PMS2P2-201ENST00000425039 1128 ntBASIC21.59■■□□□ 1.05
TM4SF4P48230 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.59■■□□□ 1.05
TM4SF4P48230 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.59■■□□□ 1.05
TM4SF4P48230 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TM4SF4P48230 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF4P48230 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.59■■□□□ 1.05
TM4SF4P48230 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.59■■□□□ 1.05
TM4SF4P48230 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.59■■□□□ 1.05
TM4SF4P48230 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.59■■□□□ 1.05
TM4SF4P48230 BNIP3P18-201ENST00000593976 575 ntBASIC21.59■■□□□ 1.05
TM4SF4P48230 AC140113.2-201ENST00000604370 208 ntBASIC21.59■■□□□ 1.05
TM4SF4P48230 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.59■■□□□ 1.05
TM4SF4P48230 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.59■■□□□ 1.05
TM4SF4P48230 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.59■■□□□ 1.05
TM4SF4P48230 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF4P48230 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF4P48230 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF4P48230 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TM4SF4P48230 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.58■■□□□ 1.05
TM4SF4P48230 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF4P48230 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF4P48230 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.58■■□□□ 1.05
TM4SF4P48230 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF4P48230 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.58■■□□□ 1.05
TM4SF4P48230 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF4P48230 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms