Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA4P43681 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA4P43681 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA4P43681 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.1■□□□□ 0.65
CHRNA4P43681 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.1■□□□□ 0.65
CHRNA4P43681 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.1■□□□□ 0.65
CHRNA4P43681 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CHRNA4P43681 AC066615.1-201ENST00000640911 628 ntBASIC19.1■□□□□ 0.65
CHRNA4P43681 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.1■□□□□ 0.65
CHRNA4P43681 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA4P43681 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.09■□□□□ 0.65
CHRNA4P43681 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA4P43681 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.09■□□□□ 0.65
CHRNA4P43681 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA4P43681 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA4P43681 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA4P43681 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA4P43681 MFAP1P1-201ENST00000442257 1255 ntBASIC19.09■□□□□ 0.65
CHRNA4P43681 AC097488.1-201ENST00000507834 756 ntBASIC19.09■□□□□ 0.65
CHRNA4P43681 AC093827.2-201ENST00000512654 315 ntBASIC19.09■□□□□ 0.65
CHRNA4P43681 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.09■□□□□ 0.65
CHRNA4P43681 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.09■□□□□ 0.65
CHRNA4P43681 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.09■□□□□ 0.65
CHRNA4P43681 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.09■□□□□ 0.65
CHRNA4P43681 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA4P43681 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA4P43681 RNF165-205ENST00000588679 2904 ntBASIC19.09■□□□□ 0.65
CHRNA4P43681 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA4P43681 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA4P43681 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.09■□□□□ 0.65
CHRNA4P43681 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CHRNA4P43681 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA4P43681 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.09■□□□□ 0.65
CHRNA4P43681 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.09■□□□□ 0.65
CHRNA4P43681 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA4P43681 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA4P43681 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.08■□□□□ 0.65
CHRNA4P43681 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA4P43681 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA4P43681 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA4P43681 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA4P43681 AC096733.2-201ENST00000609937 1394 ntBASIC19.08■□□□□ 0.65
CHRNA4P43681 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA4P43681 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA4P43681 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.08■□□□□ 0.65
CHRNA4P43681 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA4P43681 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.65
CHRNA4P43681 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA4P43681 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA4P43681 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CHRNA4P43681 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA4P43681 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA4P43681 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHRNA4P43681 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CHRNA4P43681 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.08■□□□□ 0.64
CHRNA4P43681 TSPY15P-201ENST00000457163 923 ntBASIC19.08■□□□□ 0.64
CHRNA4P43681 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.08■□□□□ 0.64
CHRNA4P43681 MIR4785-201ENST00000585005 73 ntBASIC19.08■□□□□ 0.64
CHRNA4P43681 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.08■□□□□ 0.64
CHRNA4P43681 DGCR10-201ENST00000609839 495 ntBASIC19.08■□□□□ 0.64
CHRNA4P43681 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA4P43681 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA4P43681 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA4P43681 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA4P43681 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA4P43681 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHRNA4P43681 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA4P43681 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA4P43681 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA4P43681 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.08■□□□□ 0.64
CHRNA4P43681 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA4P43681 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA4P43681 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA4P43681 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA4P43681 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA4P43681 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA4P43681 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA4P43681 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CHRNA4P43681 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA4P43681 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA4P43681 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA4P43681 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA4P43681 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.07■□□□□ 0.64
CHRNA4P43681 AL512353.2-201ENST00000448759 1962 ntBASIC19.07■□□□□ 0.64
CHRNA4P43681 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA4P43681 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CHRNA4P43681 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.07■□□□□ 0.64
CHRNA4P43681 CRYGFP-201ENST00000418459 633 ntBASIC19.07■□□□□ 0.64
CHRNA4P43681 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.07■□□□□ 0.64
CHRNA4P43681 RBM17P1-201ENST00000453646 1190 ntBASIC19.07■□□□□ 0.64
CHRNA4P43681 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.07■□□□□ 0.64
CHRNA4P43681 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.07■□□□□ 0.64
CHRNA4P43681 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA4P43681 AL355075.4-201ENST00000554988 638 ntBASIC19.07■□□□□ 0.64
CHRNA4P43681 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.07■□□□□ 0.64
CHRNA4P43681 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA4P43681 AC083906.6-201ENST00000641366 219 ntBASIC19.07■□□□□ 0.64
CHRNA4P43681 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA4P43681 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CHRNA4P43681 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms