Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC5P40937 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC5P40937 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC5P40937 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
RFC5P40937 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC5P40937 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC5P40937 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.88■□□□□ 0.93
RFC5P40937 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.88■□□□□ 0.93
RFC5P40937 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC5P40937 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFC5P40937 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.88■□□□□ 0.93
RFC5P40937 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.88■□□□□ 0.93
RFC5P40937 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC5P40937 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
RFC5P40937 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC5P40937 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.88■□□□□ 0.93
RFC5P40937 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC5P40937 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC5P40937 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC5P40937 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.88■□□□□ 0.93
RFC5P40937 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFC5P40937 RNF152P1-201ENST00000397754 604 ntBASIC20.88■□□□□ 0.93
RFC5P40937 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.88■□□□□ 0.93
RFC5P40937 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.88■□□□□ 0.93
RFC5P40937 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RFC5P40937 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
RFC5P40937 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC5P40937 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC5P40937 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC5P40937 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.87■□□□□ 0.93
RFC5P40937 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFC5P40937 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFC5P40937 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.87■□□□□ 0.93
RFC5P40937 AC005332.7-201ENST00000614046 2005 ntBASIC20.87■□□□□ 0.93
RFC5P40937 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFC5P40937 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC5P40937 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC5P40937 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RFC5P40937 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC5P40937 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.87■□□□□ 0.93
RFC5P40937 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.87■□□□□ 0.93
RFC5P40937 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.87■□□□□ 0.93
RFC5P40937 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RFC5P40937 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.87■□□□□ 0.93
RFC5P40937 MIR3180-5-201ENST00000583743 153 ntBASIC20.87■□□□□ 0.93
RFC5P40937 AC140113.3-201ENST00000605663 199 ntBASIC20.87■□□□□ 0.93
RFC5P40937 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC5P40937 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC5P40937 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC5P40937 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.87■□□□□ 0.93
RFC5P40937 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.87■□□□□ 0.93
RFC5P40937 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC5P40937 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC5P40937 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RFC5P40937 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC5P40937 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFC5P40937 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC5P40937 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.86■□□□□ 0.93
RFC5P40937 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.86■□□□□ 0.93
RFC5P40937 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFC5P40937 AC063952.2-201ENST00000498792 1227 ntBASIC20.86■□□□□ 0.93
RFC5P40937 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.86■□□□□ 0.93
RFC5P40937 AC011558.1-201ENST00000623459 338 ntBASIC20.86■□□□□ 0.93
RFC5P40937 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
RFC5P40937 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC5P40937 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC5P40937 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.86■□□□□ 0.93
RFC5P40937 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFC5P40937 AL109659.2-201ENST00000606809 1674 ntBASIC20.86■□□□□ 0.93
RFC5P40937 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC5P40937 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC5P40937 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC5P40937 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RFC5P40937 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC5P40937 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFC5P40937 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
RFC5P40937 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC5P40937 RCC2P3-201ENST00000418112 1537 ntBASIC20.85■□□□□ 0.93
RFC5P40937 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC5P40937 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.85■□□□□ 0.93
RFC5P40937 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC5P40937 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC5P40937 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.85■□□□□ 0.93
RFC5P40937 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFC5P40937 TSPY5P-201ENST00000426936 936 ntBASIC20.85■□□□□ 0.93
RFC5P40937 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.85■□□□□ 0.93
RFC5P40937 LINC01238-205ENST00000567549 1107 ntBASIC20.85■□□□□ 0.93
RFC5P40937 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.85■□□□□ 0.93
RFC5P40937 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFC5P40937 AL023973.1-201ENST00000624619 620 ntBASIC20.85■□□□□ 0.93
RFC5P40937 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC5P40937 KRT8P32-201ENST00000512863 1461 ntBASIC20.85■□□□□ 0.93
RFC5P40937 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.85■□□□□ 0.93
RFC5P40937 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC5P40937 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFC5P40937 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC5P40937 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC5P40937 AC036111.1-201ENST00000533973 1582 ntBASIC20.85■□□□□ 0.93
RFC5P40937 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.84■□□□□ 0.93
RFC5P40937 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms