Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SOX6P35712 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SOX6P35712 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
SOX6P35712 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
SOX6P35712 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.97■□□□□ 0.31
SOX6P35712 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.97■□□□□ 0.31
SOX6P35712 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 AC073592.3-201ENST00000625118 1834 ntBASIC16.97■□□□□ 0.31
SOX6P35712 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SOX6P35712 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SOX6P35712 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
SOX6P35712 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.97■□□□□ 0.31
SOX6P35712 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SOX6P35712 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX6P35712 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX6P35712 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SOX6P35712 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.96■□□□□ 0.31
SOX6P35712 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
SOX6P35712 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX6P35712 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.96■□□□□ 0.31
SOX6P35712 LINC00896-202ENST00000609602 2128 ntBASIC16.96■□□□□ 0.31
SOX6P35712 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX6P35712 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SOX6P35712 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX6P35712 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX6P35712 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SOX6P35712 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SOX6P35712 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX6P35712 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX6P35712 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.96■□□□□ 0.31
SOX6P35712 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.96■□□□□ 0.31
SOX6P35712 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.96■□□□□ 0.31
SOX6P35712 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SOX6P35712 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX6P35712 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.96■□□□□ 0.31
SOX6P35712 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SOX6P35712 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SOX6P35712 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SOX6P35712 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.96■□□□□ 0.31
SOX6P35712 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SOX6P35712 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.96■□□□□ 0.3
SOX6P35712 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SOX6P35712 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.96■□□□□ 0.3
SOX6P35712 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SOX6P35712 ZNF815P-204ENST00000434898 1737 ntBASIC16.96■□□□□ 0.3
SOX6P35712 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
SOX6P35712 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
SOX6P35712 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.96■□□□□ 0.3
SOX6P35712 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SOX6P35712 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
SOX6P35712 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SOX6P35712 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SOX6P35712 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.95■□□□□ 0.3
SOX6P35712 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.95■□□□□ 0.3
SOX6P35712 DUX4L2-201ENST00000561772 1275 ntBASIC16.95■□□□□ 0.3
SOX6P35712 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.95■□□□□ 0.3
SOX6P35712 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
SOX6P35712 DUX4L6-201ENST00000626483 1275 ntBASIC16.95■□□□□ 0.3
SOX6P35712 DUX4L1-201ENST00000627662 1275 ntBASIC16.95■□□□□ 0.3
SOX6P35712 DUX4L8-201ENST00000629013 1275 ntBASIC16.95■□□□□ 0.3
SOX6P35712 DUX4L3-201ENST00000630187 1275 ntBASIC16.95■□□□□ 0.3
SOX6P35712 DUX4L7-201ENST00000630678 1275 ntBASIC16.95■□□□□ 0.3
SOX6P35712 DUX4L5-201ENST00000630834 1275 ntBASIC16.95■□□□□ 0.3
SOX6P35712 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.95■□□□□ 0.3
SOX6P35712 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SOX6P35712 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.95■□□□□ 0.3
SOX6P35712 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.95■□□□□ 0.3
SOX6P35712 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SOX6P35712 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
SOX6P35712 RBM17P2-201ENST00000616397 1405 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms