Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
KRT9P35527 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.71■□□□□ 0.91
KRT9P35527 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
KRT9P35527 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
KRT9P35527 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.71■□□□□ 0.91
KRT9P35527 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.71■□□□□ 0.91
KRT9P35527 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT9P35527 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.71■□□□□ 0.91
KRT9P35527 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 NBPF21P-201ENST00000425093 1451 ntBASIC20.71■□□□□ 0.91
KRT9P35527 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
KRT9P35527 ANO7L1-203ENST00000602586 1720 ntBASIC20.71■□□□□ 0.91
KRT9P35527 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT9P35527 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 AC233263.1-201ENST00000578059 224 ntBASIC20.71■□□□□ 0.91
KRT9P35527 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.71■□□□□ 0.91
KRT9P35527 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
KRT9P35527 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT9P35527 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
KRT9P35527 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT9P35527 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
KRT9P35527 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
KRT9P35527 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT9P35527 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.7■□□□□ 0.9
KRT9P35527 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT9P35527 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.7■□□□□ 0.9
KRT9P35527 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT9P35527 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT9P35527 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT9P35527 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.7■□□□□ 0.9
KRT9P35527 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
KRT9P35527 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
KRT9P35527 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
KRT9P35527 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
KRT9P35527 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT9P35527 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT9P35527 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KRT9P35527 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT9P35527 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT9P35527 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KRT9P35527 AL354751.1-201ENST00000412768 1863 ntBASIC20.69■□□□□ 0.9
KRT9P35527 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT9P35527 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT9P35527 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
KRT9P35527 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT9P35527 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KRT9P35527 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT9P35527 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT9P35527 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT9P35527 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT9P35527 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT9P35527 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT9P35527 AC083906.6-201ENST00000641366 219 ntBASIC20.69■□□□□ 0.9
KRT9P35527 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KRT9P35527 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
KRT9P35527 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT9P35527 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT9P35527 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KRT9P35527 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KRT9P35527 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT9P35527 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT9P35527 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT9P35527 AL133373.2-201ENST00000623187 2828 ntBASIC20.68■□□□□ 0.9
KRT9P35527 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT9P35527 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
KRT9P35527 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
KRT9P35527 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT9P35527 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT9P35527 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT9P35527 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms