Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD13P35453 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD13P35453 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD13P35453 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXD13P35453 Z98044.1-201ENST00000632503 1764 ntBASIC20.69■□□□□ 0.9
HOXD13P35453 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HOXD13P35453 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HOXD13P35453 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXD13P35453 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD13P35453 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HOXD13P35453 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXD13P35453 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD13P35453 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HOXD13P35453 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD13P35453 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD13P35453 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXD13P35453 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD13P35453 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HOXD13P35453 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXD13P35453 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HOXD13P35453 INGX-201ENST00000359239 846 ntBASIC20.68■□□□□ 0.9
HOXD13P35453 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HOXD13P35453 CA15P1-201ENST00000481698 905 ntBASIC20.68■□□□□ 0.9
HOXD13P35453 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD13P35453 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXD13P35453 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXD13P35453 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXD13P35453 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXD13P35453 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD13P35453 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
HOXD13P35453 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXD13P35453 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD13P35453 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXD13P35453 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD13P35453 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXD13P35453 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD13P35453 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
HOXD13P35453 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD13P35453 GPAT2P1-201ENST00000444924 1672 ntBASIC20.67■□□□□ 0.9
HOXD13P35453 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD13P35453 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD13P35453 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXD13P35453 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD13P35453 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD13P35453 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HOXD13P35453 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXD13P35453 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD13P35453 RCC2P3-201ENST00000418112 1537 ntBASIC20.67■□□□□ 0.9
HOXD13P35453 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HOXD13P35453 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD13P35453 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD13P35453 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD13P35453 ANO7L1-203ENST00000602586 1720 ntBASIC20.67■□□□□ 0.9
HOXD13P35453 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD13P35453 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXD13P35453 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD13P35453 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD13P35453 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD13P35453 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD13P35453 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HOXD13P35453 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
HOXD13P35453 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD13P35453 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD13P35453 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HOXD13P35453 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXD13P35453 AL023284.2-201ENST00000405850 579 ntBASIC20.66■□□□□ 0.9
HOXD13P35453 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
HOXD13P35453 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXD13P35453 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD13P35453 AC010947.1-201ENST00000623454 693 ntBASIC20.66■□□□□ 0.9
HOXD13P35453 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HOXD13P35453 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXD13P35453 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXD13P35453 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD13P35453 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXD13P35453 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HOXD13P35453 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HOXD13P35453 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HOXD13P35453 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXD13P35453 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HOXD13P35453 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD13P35453 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD13P35453 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD13P35453 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD13P35453 AL499627.1-201ENST00000569373 2188 ntBASIC20.65■□□□□ 0.9
HOXD13P35453 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD13P35453 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD13P35453 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HOXD13P35453 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXD13P35453 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXD13P35453 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD13P35453 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXD13P35453 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXD13P35453 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD13P35453 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXD13P35453 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HOXD13P35453 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXD13P35453 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HOXD13P35453 AC008556.1-201ENST00000610908 2040 ntBASIC20.65■□□□□ 0.9
HOXD13P35453 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms