Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCKBRP32239 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCKBRP32239 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCKBRP32239 TSPY23P-201ENST00000440136 739 ntBASIC18.17■□□□□ 0.5
CCKBRP32239 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCKBRP32239 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.17■□□□□ 0.5
CCKBRP32239 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.17■□□□□ 0.5
CCKBRP32239 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.17■□□□□ 0.5
CCKBRP32239 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCKBRP32239 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCKBRP32239 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCKBRP32239 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.17■□□□□ 0.5
CCKBRP32239 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCKBRP32239 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCKBRP32239 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCKBRP32239 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.17■□□□□ 0.5
CCKBRP32239 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCKBRP32239 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.17■□□□□ 0.5
CCKBRP32239 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCKBRP32239 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCKBRP32239 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCKBRP32239 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.17■□□□□ 0.5
CCKBRP32239 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CCKBRP32239 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.16■□□□□ 0.5
CCKBRP32239 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CCKBRP32239 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCKBRP32239 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.16■□□□□ 0.5
CCKBRP32239 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.16■□□□□ 0.5
CCKBRP32239 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.16■□□□□ 0.5
CCKBRP32239 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 PCDHAC2-203ENST00000615316 3011 ntBASIC18.16■□□□□ 0.5
CCKBRP32239 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCKBRP32239 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
CCKBRP32239 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 ATP5G2P1-201ENST00000433580 426 ntBASIC18.16■□□□□ 0.5
CCKBRP32239 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.16■□□□□ 0.5
CCKBRP32239 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.16■□□□□ 0.5
CCKBRP32239 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.16■□□□□ 0.5
CCKBRP32239 AC034232.1-201ENST00000506026 1064 ntBASIC18.16■□□□□ 0.5
CCKBRP32239 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.16■□□□□ 0.5
CCKBRP32239 CLEC4GP1-201ENST00000596555 870 ntBASIC18.16■□□□□ 0.5
CCKBRP32239 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCKBRP32239 AL121894.2-201ENST00000602977 491 ntBASIC18.16■□□□□ 0.5
CCKBRP32239 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.16■□□□□ 0.5
CCKBRP32239 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.16■□□□□ 0.5
CCKBRP32239 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.16■□□□□ 0.5
CCKBRP32239 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.16■□□□□ 0.5
CCKBRP32239 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.16■□□□□ 0.5
CCKBRP32239 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CCKBRP32239 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCKBRP32239 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCKBRP32239 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCKBRP32239 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCKBRP32239 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCKBRP32239 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CCKBRP32239 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCKBRP32239 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CCKBRP32239 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.15■□□□□ 0.5
CCKBRP32239 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.15■□□□□ 0.5
CCKBRP32239 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.15■□□□□ 0.5
CCKBRP32239 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.15■□□□□ 0.5
CCKBRP32239 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.15■□□□□ 0.5
CCKBRP32239 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCKBRP32239 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.15■□□□□ 0.5
CCKBRP32239 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCKBRP32239 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCKBRP32239 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCKBRP32239 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.15■□□□□ 0.5
CCKBRP32239 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCKBRP32239 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCKBRP32239 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.15■□□□□ 0.5
CCKBRP32239 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.15■□□□□ 0.5
CCKBRP32239 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.15■□□□□ 0.5
CCKBRP32239 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCKBRP32239 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.15■□□□□ 0.5
CCKBRP32239 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCKBRP32239 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCKBRP32239 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCKBRP32239 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCKBRP32239 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCKBRP32239 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCKBRP32239 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CCKBRP32239 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCKBRP32239 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCKBRP32239 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.14■□□□□ 0.49
CCKBRP32239 AC099778.1-201ENST00000568593 1911 ntBASIC18.14■□□□□ 0.49
CCKBRP32239 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CCKBRP32239 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms