Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPN3P26045 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.31■□□□□ 0.68
PTPN3P26045 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN3P26045 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.31■□□□□ 0.68
PTPN3P26045 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN3P26045 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN3P26045 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN3P26045 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN3P26045 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN3P26045 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPN3P26045 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PTPN3P26045 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPN3P26045 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN3P26045 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN3P26045 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPN3P26045 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PTPN3P26045 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PTPN3P26045 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN3P26045 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPN3P26045 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PTPN3P26045 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN3P26045 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN3P26045 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPN3P26045 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.3■□□□□ 0.68
PTPN3P26045 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PTPN3P26045 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPN3P26045 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN3P26045 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN3P26045 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN3P26045 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN3P26045 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN3P26045 Z98044.1-201ENST00000632503 1764 ntBASIC19.3■□□□□ 0.68
PTPN3P26045 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN3P26045 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN3P26045 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN3P26045 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.3■□□□□ 0.68
PTPN3P26045 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPN3P26045 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PTPN3P26045 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
PTPN3P26045 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PTPN3P26045 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN3P26045 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
PTPN3P26045 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPN3P26045 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN3P26045 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN3P26045 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PTPN3P26045 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPN3P26045 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN3P26045 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN3P26045 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN3P26045 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN3P26045 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.29■□□□□ 0.68
PTPN3P26045 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN3P26045 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN3P26045 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN3P26045 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
PTPN3P26045 KRT8P3-201ENST00000519669 1449 ntBASIC19.29■□□□□ 0.68
PTPN3P26045 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.29■□□□□ 0.68
PTPN3P26045 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN3P26045 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN3P26045 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN3P26045 AC008550.1-201ENST00000511500 884 ntBASIC19.29■□□□□ 0.68
PTPN3P26045 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN3P26045 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN3P26045 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.29■□□□□ 0.68
PTPN3P26045 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN3P26045 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN3P26045 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN3P26045 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN3P26045 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN3P26045 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN3P26045 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN3P26045 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPN3P26045 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN3P26045 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN3P26045 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN3P26045 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN3P26045 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN3P26045 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN3P26045 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.28■□□□□ 0.68
PTPN3P26045 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN3P26045 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.28■□□□□ 0.68
PTPN3P26045 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.28■□□□□ 0.68
PTPN3P26045 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.28■□□□□ 0.68
PTPN3P26045 REXO1L10P-201ENST00000615707 1290 ntBASIC19.28■□□□□ 0.68
PTPN3P26045 REXO1L12P-201ENST00000622156 912 ntBASIC19.28■□□□□ 0.68
PTPN3P26045 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PTPN3P26045 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PTPN3P26045 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN3P26045 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN3P26045 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN3P26045 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN3P26045 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN3P26045 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN3P26045 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN3P26045 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN3P26045 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PTPN3P26045 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PTPN3P26045 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PTPN3P26045 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms