Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.31■□□□□ 0.84
BRD2P25440 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
BRD2P25440 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.31■□□□□ 0.84
BRD2P25440 AC093827.2-201ENST00000512654 315 ntBASIC20.31■□□□□ 0.84
BRD2P25440 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.31■□□□□ 0.84
BRD2P25440 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.31■□□□□ 0.84
BRD2P25440 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.31■□□□□ 0.84
BRD2P25440 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.31■□□□□ 0.84
BRD2P25440 AC130371.2-201ENST00000619443 611 ntBASIC20.31■□□□□ 0.84
BRD2P25440 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.31■□□□□ 0.84
BRD2P25440 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.31■□□□□ 0.84
BRD2P25440 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRD2P25440 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRD2P25440 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRD2P25440 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
BRD2P25440 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRD2P25440 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.3■□□□□ 0.84
BRD2P25440 FP475955.4-201ENST00000623131 1990 ntBASIC20.3■□□□□ 0.84
BRD2P25440 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRD2P25440 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.3■□□□□ 0.84
BRD2P25440 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.3■□□□□ 0.84
BRD2P25440 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRD2P25440 AC018445.3-201ENST00000624177 1945 ntBASIC20.3■□□□□ 0.84
BRD2P25440 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRD2P25440 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
BRD2P25440 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRD2P25440 AL355355.2-201ENST00000442321 338 ntBASIC20.3■□□□□ 0.84
BRD2P25440 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.3■□□□□ 0.84
BRD2P25440 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
BRD2P25440 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.3■□□□□ 0.84
BRD2P25440 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.3■□□□□ 0.84
BRD2P25440 REXO1L10P-201ENST00000615707 1290 ntBASIC20.3■□□□□ 0.84
BRD2P25440 REXO1L12P-201ENST00000622156 912 ntBASIC20.3■□□□□ 0.84
BRD2P25440 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRD2P25440 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRD2P25440 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
BRD2P25440 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRD2P25440 FSCN1P1-201ENST00000568912 1481 ntBASIC20.3■□□□□ 0.84
BRD2P25440 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
BRD2P25440 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRD2P25440 AL391005.1-201ENST00000623953 2435 ntBASIC20.29■□□□□ 0.84
BRD2P25440 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.29■□□□□ 0.84
BRD2P25440 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.29■□□□□ 0.84
BRD2P25440 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
BRD2P25440 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.29■□□□□ 0.84
BRD2P25440 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.29■□□□□ 0.84
BRD2P25440 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
BRD2P25440 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
BRD2P25440 FAM207BP-201ENST00000447172 505 ntBASIC20.29■□□□□ 0.84
BRD2P25440 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BRD2P25440 AC116562.2-201ENST00000507042 360 ntBASIC20.29■□□□□ 0.84
BRD2P25440 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.29■□□□□ 0.84
BRD2P25440 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.29■□□□□ 0.84
BRD2P25440 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.29■□□□□ 0.84
BRD2P25440 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.29■□□□□ 0.84
BRD2P25440 FEM1AP3-201ENST00000403722 1741 ntBASIC20.29■□□□□ 0.84
BRD2P25440 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.29■□□□□ 0.84
BRD2P25440 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.29■□□□□ 0.84
BRD2P25440 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.29■□□□□ 0.84
BRD2P25440 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRD2P25440 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRD2P25440 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRD2P25440 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRD2P25440 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRD2P25440 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.28■□□□□ 0.84
BRD2P25440 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRD2P25440 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
BRD2P25440 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRD2P25440 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRD2P25440 AP003071.4-201ENST00000562276 1284 ntBASIC20.28■□□□□ 0.84
BRD2P25440 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.28■□□□□ 0.84
BRD2P25440 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRD2P25440 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.28■□□□□ 0.84
BRD2P25440 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRD2P25440 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRD2P25440 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRD2P25440 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms