Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 AC020763.4-201ENST00000623414 4170 ntBASIC17.7■□□□□ 0.42
CHMP24386 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 AF186192.3-201ENST00000583427 947 ntBASIC17.7■□□□□ 0.42
CHMP24386 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMP24386 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHMP24386 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CHMP24386 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMP24386 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.7■□□□□ 0.42
CHMP24386 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHMP24386 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 KRT17P2-201ENST00000300992 1314 ntBASIC17.7■□□□□ 0.42
CHMP24386 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMP24386 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMP24386 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP24386 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHMP24386 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP24386 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.69■□□□□ 0.42
CHMP24386 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP24386 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHMP24386 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP24386 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP24386 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CHMP24386 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHMP24386 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP24386 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHMP24386 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP24386 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CHMP24386 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP24386 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP24386 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CHMP24386 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP24386 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHMP24386 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.68■□□□□ 0.42
CHMP24386 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHMP24386 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 AP002982.1-201ENST00000492365 877 ntBASIC17.68■□□□□ 0.42
CHMP24386 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.68■□□□□ 0.42
CHMP24386 C1QL1P1-201ENST00000568105 661 ntBASIC17.68■□□□□ 0.42
CHMP24386 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP24386 AC073195.1-201ENST00000607241 877 ntBASIC17.68■□□□□ 0.42
CHMP24386 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP24386 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHMP24386 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHMP24386 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP24386 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CHMP24386 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CHMP24386 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP24386 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP24386 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP24386 ZNF815P-204ENST00000434898 1737 ntBASIC17.67■□□□□ 0.42
CHMP24386 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP24386 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP24386 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHMP24386 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP24386 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP24386 AC113410.3-201ENST00000623366 203 ntBASIC17.67■□□□□ 0.42
CHMP24386 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP24386 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms