Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYN1P17600 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYN1P17600 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYN1P17600 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYN1P17600 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.6■□□□□ 0.89
SYN1P17600 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SYN1P17600 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYN1P17600 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.6■□□□□ 0.89
SYN1P17600 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYN1P17600 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYN1P17600 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
SYN1P17600 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SYN1P17600 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.6■□□□□ 0.89
SYN1P17600 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.6■□□□□ 0.89
SYN1P17600 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SYN1P17600 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.6■□□□□ 0.89
SYN1P17600 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.6■□□□□ 0.89
SYN1P17600 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYN1P17600 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYN1P17600 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYN1P17600 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYN1P17600 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.6■□□□□ 0.89
SYN1P17600 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SYN1P17600 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.59■□□□□ 0.89
SYN1P17600 AC026310.3-201ENST00000625186 2373 ntBASIC20.59■□□□□ 0.89
SYN1P17600 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYN1P17600 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYN1P17600 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYN1P17600 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYN1P17600 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYN1P17600 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.59■□□□□ 0.89
SYN1P17600 AC098831.1-202ENST00000438821 336 ntBASIC20.59■□□□□ 0.89
SYN1P17600 MINOS1P3-201ENST00000457048 203 ntBASIC20.59■□□□□ 0.89
SYN1P17600 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYN1P17600 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.59■□□□□ 0.89
SYN1P17600 AC139887.3-201ENST00000568585 713 ntBASIC20.59■□□□□ 0.89
SYN1P17600 AC010327.4-202ENST00000591484 748 ntBASIC20.59■□□□□ 0.89
SYN1P17600 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.59■□□□□ 0.89
SYN1P17600 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYN1P17600 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.59■□□□□ 0.89
SYN1P17600 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
SYN1P17600 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SYN1P17600 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
SYN1P17600 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.59■□□□□ 0.89
SYN1P17600 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYN1P17600 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.58■□□□□ 0.89
SYN1P17600 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYN1P17600 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.58■□□□□ 0.89
SYN1P17600 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SYN1P17600 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYN1P17600 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYN1P17600 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYN1P17600 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.58■□□□□ 0.89
SYN1P17600 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.58■□□□□ 0.89
SYN1P17600 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SYN1P17600 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYN1P17600 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYN1P17600 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYN1P17600 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYN1P17600 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYN1P17600 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.58■□□□□ 0.88
SYN1P17600 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYN1P17600 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYN1P17600 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
SYN1P17600 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.57■□□□□ 0.88
SYN1P17600 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYN1P17600 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYN1P17600 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYN1P17600 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYN1P17600 PGAM5P1-201ENST00000518923 814 ntBASIC20.57■□□□□ 0.88
SYN1P17600 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.57■□□□□ 0.88
SYN1P17600 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.57■□□□□ 0.88
SYN1P17600 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.57■□□□□ 0.88
SYN1P17600 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.57■□□□□ 0.88
SYN1P17600 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYN1P17600 AP001160.2-201ENST00000596071 487 ntBASIC20.57■□□□□ 0.88
SYN1P17600 GPR32P1-201ENST00000601788 811 ntBASIC20.57■□□□□ 0.88
SYN1P17600 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.57■□□□□ 0.88
SYN1P17600 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.57■□□□□ 0.88
SYN1P17600 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SYN1P17600 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYN1P17600 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.57■□□□□ 0.88
SYN1P17600 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.57■□□□□ 0.88
SYN1P17600 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SYN1P17600 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN1P17600 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN1P17600 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN1P17600 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.56■□□□□ 0.88
SYN1P17600 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN1P17600 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
SYN1P17600 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN1P17600 VENTXP7-201ENST00000475503 772 ntBASIC20.56■□□□□ 0.88
SYN1P17600 GUSBP12-201ENST00000513727 720 ntBASIC20.56■□□□□ 0.88
SYN1P17600 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN1P17600 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.56■□□□□ 0.88
SYN1P17600 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.56■□□□□ 0.88
SYN1P17600 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYN1P17600 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYN1P17600 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYN1P17600 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms