Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SMIM17P0DL12 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMIM17P0DL12 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SMIM17P0DL12 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM17P0DL12 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM17P0DL12 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.09□□□□□ -0.15
SMIM17P0DL12 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM17P0DL12 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM17P0DL12 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM17P0DL12 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM17P0DL12 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM17P0DL12 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.09□□□□□ -0.15
SMIM17P0DL12 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM17P0DL12 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM17P0DL12 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.09□□□□□ -0.15
SMIM17P0DL12 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.09□□□□□ -0.15
SMIM17P0DL12 NTF6G-201ENST00000591094 616 ntBASIC14.09□□□□□ -0.15
SMIM17P0DL12 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SMIM17P0DL12 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
SMIM17P0DL12 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM17P0DL12 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.09□□□□□ -0.15
SMIM17P0DL12 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SMIM17P0DL12 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM17P0DL12 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SMIM17P0DL12 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM17P0DL12 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.09□□□□□ -0.15
SMIM17P0DL12 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.09□□□□□ -0.15
SMIM17P0DL12 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM17P0DL12 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SMIM17P0DL12 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM17P0DL12 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.08□□□□□ -0.15
SMIM17P0DL12 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
SMIM17P0DL12 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM17P0DL12 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM17P0DL12 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM17P0DL12 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM17P0DL12 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM17P0DL12 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM17P0DL12 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM17P0DL12 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM17P0DL12 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM17P0DL12 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 AC137761.2-201ENST00000561729 223 ntBASIC14.08□□□□□ -0.16
SMIM17P0DL12 AC145350.3-201ENST00000569033 163 ntBASIC14.08□□□□□ -0.16
SMIM17P0DL12 CYP2T3P-201ENST00000601990 817 ntBASIC14.08□□□□□ -0.16
SMIM17P0DL12 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM17P0DL12 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM17P0DL12 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM17P0DL12 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM17P0DL12 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM17P0DL12 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 AC016769.1-201ENST00000409132 1010 ntBASIC14.07□□□□□ -0.16
SMIM17P0DL12 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM17P0DL12 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 MST1L-201ENST00000442552 2185 ntBASIC14.07□□□□□ -0.16
SMIM17P0DL12 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.07□□□□□ -0.16
SMIM17P0DL12 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms