Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.85■□□□□ 0.93
TPM1P09493 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TPM1P09493 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.85■□□□□ 0.93
TPM1P09493 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TPM1P09493 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.85■□□□□ 0.93
TPM1P09493 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.85■□□□□ 0.93
TPM1P09493 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM1P09493 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TPM1P09493 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.84■□□□□ 0.93
TPM1P09493 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.84■□□□□ 0.93
TPM1P09493 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
TPM1P09493 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM1P09493 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.84■□□□□ 0.93
TPM1P09493 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM1P09493 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM1P09493 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TPM1P09493 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
TPM1P09493 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.84■□□□□ 0.93
TPM1P09493 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TPM1P09493 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
TPM1P09493 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.84■□□□□ 0.93
TPM1P09493 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TPM1P09493 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.84■□□□□ 0.93
TPM1P09493 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TPM1P09493 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TPM1P09493 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TPM1P09493 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TPM1P09493 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TPM1P09493 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TPM1P09493 BICD1-207ENST00000551848 1962 ntBASIC20.83■□□□□ 0.93
TPM1P09493 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.83■□□□□ 0.93
TPM1P09493 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TPM1P09493 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM1P09493 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.83■□□□□ 0.93
TPM1P09493 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.83■□□□□ 0.93
TPM1P09493 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
TPM1P09493 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TPM1P09493 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TPM1P09493 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TPM1P09493 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
TPM1P09493 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
TPM1P09493 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TPM1P09493 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
TPM1P09493 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TPM1P09493 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
TPM1P09493 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.83■□□□□ 0.92
TPM1P09493 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.83■□□□□ 0.92
TPM1P09493 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TPM1P09493 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TPM1P09493 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM1P09493 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM1P09493 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM1P09493 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
TPM1P09493 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM1P09493 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM1P09493 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM1P09493 AL354751.1-201ENST00000412768 1863 ntBASIC20.82■□□□□ 0.92
TPM1P09493 ANO7L1-203ENST00000602586 1720 ntBASIC20.82■□□□□ 0.92
TPM1P09493 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TPM1P09493 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM1P09493 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM1P09493 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TPM1P09493 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TPM1P09493 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM1P09493 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.82■□□□□ 0.92
TPM1P09493 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.82■□□□□ 0.92
TPM1P09493 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.82■□□□□ 0.92
TPM1P09493 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.82■□□□□ 0.92
TPM1P09493 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM1P09493 AC083906.6-201ENST00000641366 219 ntBASIC20.82■□□□□ 0.92
TPM1P09493 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM1P09493 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM1P09493 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TPM1P09493 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM1P09493 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM1P09493 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TPM1P09493 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
TPM1P09493 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM1P09493 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TPM1P09493 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.81■□□□□ 0.92
TPM1P09493 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM1P09493 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms