Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA1P02708 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA1P02708 AL109659.2-201ENST00000606809 1674 ntBASIC20.6■□□□□ 0.89
CHRNA1P02708 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA1P02708 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRNA1P02708 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA1P02708 AC008556.1-201ENST00000610908 2040 ntBASIC20.6■□□□□ 0.89
CHRNA1P02708 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
CHRNA1P02708 AL512353.2-201ENST00000448759 1962 ntBASIC20.59■□□□□ 0.89
CHRNA1P02708 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHRNA1P02708 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 AP002383.4-201ENST00000442518 975 ntBASIC20.59■□□□□ 0.89
CHRNA1P02708 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.59■□□□□ 0.89
CHRNA1P02708 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
CHRNA1P02708 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 AL121672.3-201ENST00000608644 468 ntBASIC20.59■□□□□ 0.89
CHRNA1P02708 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRNA1P02708 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRNA1P02708 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA1P02708 RCC2P3-201ENST00000418112 1537 ntBASIC20.58■□□□□ 0.89
CHRNA1P02708 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CHRNA1P02708 AL391807.1-203ENST00000604392 2365 ntBASIC20.58■□□□□ 0.89
CHRNA1P02708 PCDHAC2-203ENST00000615316 3011 ntBASIC20.58■□□□□ 0.89
CHRNA1P02708 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.58■□□□□ 0.89
CHRNA1P02708 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA1P02708 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CHRNA1P02708 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.58■□□□□ 0.89
CHRNA1P02708 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.58■□□□□ 0.89
CHRNA1P02708 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.58■□□□□ 0.89
CHRNA1P02708 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.58■□□□□ 0.89
CHRNA1P02708 BX276092.5-203ENST00000456199 560 ntBASIC20.58■□□□□ 0.89
CHRNA1P02708 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.58■□□□□ 0.89
CHRNA1P02708 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.58■□□□□ 0.89
CHRNA1P02708 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.58■□□□□ 0.89
CHRNA1P02708 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA1P02708 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CHRNA1P02708 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.58■□□□□ 0.88
CHRNA1P02708 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA1P02708 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA1P02708 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA1P02708 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CHRNA1P02708 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.58■□□□□ 0.88
CHRNA1P02708 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA1P02708 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA1P02708 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA1P02708 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNA1P02708 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA1P02708 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CHRNA1P02708 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA1P02708 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA1P02708 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA1P02708 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.57■□□□□ 0.88
CHRNA1P02708 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHRNA1P02708 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CHRNA1P02708 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA1P02708 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHRNA1P02708 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA1P02708 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA1P02708 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA1P02708 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.57■□□□□ 0.88
CHRNA1P02708 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNA1P02708 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.57■□□□□ 0.88
CHRNA1P02708 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA1P02708 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.57■□□□□ 0.88
CHRNA1P02708 AL136038.4-201ENST00000603606 1261 ntBASIC20.57■□□□□ 0.88
CHRNA1P02708 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.57■□□□□ 0.88
CHRNA1P02708 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.57■□□□□ 0.88
CHRNA1P02708 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.57■□□□□ 0.88
CHRNA1P02708 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA1P02708 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA1P02708 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNA1P02708 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.57■□□□□ 0.88
CHRNA1P02708 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNA1P02708 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNA1P02708 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA1P02708 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CHRNA1P02708 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CHRNA1P02708 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNA1P02708 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNA1P02708 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA1P02708 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA1P02708 MIR662-201ENST00000384847 95 ntBASIC20.56■□□□□ 0.88
CHRNA1P02708 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNA1P02708 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA1P02708 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.56■□□□□ 0.88
CHRNA1P02708 MIR3652-201ENST00000579335 131 ntBASIC20.56■□□□□ 0.88
CHRNA1P02708 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA1P02708 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms