Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMC2O95347 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMC2O95347 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
SMC2O95347 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.4■■□□□ 1.02
SMC2O95347 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 NBPF21P-201ENST00000425093 1451 ntBASIC21.4■■□□□ 1.02
SMC2O95347 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.4■■□□□ 1.02
SMC2O95347 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.4■■□□□ 1.02
SMC2O95347 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.4■■□□□ 1.02
SMC2O95347 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.4■■□□□ 1.02
SMC2O95347 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.4■■□□□ 1.02
SMC2O95347 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.4■■□□□ 1.02
SMC2O95347 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
SMC2O95347 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.4■■□□□ 1.02
SMC2O95347 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMC2O95347 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
SMC2O95347 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
SMC2O95347 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SMC2O95347 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.39■■□□□ 1.02
SMC2O95347 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SMC2O95347 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SMC2O95347 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SMC2O95347 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.39■■□□□ 1.02
SMC2O95347 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
SMC2O95347 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
SMC2O95347 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SMC2O95347 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMC2O95347 TSPY21P-201ENST00000433481 731 ntBASIC21.39■■□□□ 1.01
SMC2O95347 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.39■■□□□ 1.01
SMC2O95347 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.39■■□□□ 1.01
SMC2O95347 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.39■■□□□ 1.01
SMC2O95347 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMC2O95347 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.39■■□□□ 1.01
SMC2O95347 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMC2O95347 AC004264.1-201ENST00000608354 794 ntBASIC21.39■■□□□ 1.01
SMC2O95347 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.39■■□□□ 1.01
SMC2O95347 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.39■■□□□ 1.01
SMC2O95347 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMC2O95347 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMC2O95347 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMC2O95347 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMC2O95347 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMC2O95347 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMC2O95347 AC090164.3-201ENST00000610780 2143 ntBASIC21.38■■□□□ 1.01
SMC2O95347 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMC2O95347 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMC2O95347 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SMC2O95347 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMC2O95347 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.38■■□□□ 1.01
SMC2O95347 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMC2O95347 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SMC2O95347 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMC2O95347 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.38■■□□□ 1.01
SMC2O95347 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMC2O95347 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SMC2O95347 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMC2O95347 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.38■■□□□ 1.01
SMC2O95347 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMC2O95347 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.38■■□□□ 1.01
SMC2O95347 AC090192.1-201ENST00000517740 490 ntBASIC21.38■■□□□ 1.01
SMC2O95347 AL160286.2-201ENST00000567150 934 ntBASIC21.38■■□□□ 1.01
SMC2O95347 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SMC2O95347 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.38■■□□□ 1.01
SMC2O95347 AC135050.7-201ENST00000624508 2218 ntBASIC21.38■■□□□ 1.01
SMC2O95347 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.38■■□□□ 1.01
SMC2O95347 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMC2O95347 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMC2O95347 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
SMC2O95347 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMC2O95347 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.38■■□□□ 1.01
SMC2O95347 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMC2O95347 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMC2O95347 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMC2O95347 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.37■■□□□ 1.01
SMC2O95347 HTR7P1-202ENST00000624664 4411 ntBASIC21.37■■□□□ 1.01
SMC2O95347 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SMC2O95347 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMC2O95347 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMC2O95347 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMC2O95347 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SMC2O95347 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.37■■□□□ 1.01
SMC2O95347 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.37■■□□□ 1.01
SMC2O95347 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.37■■□□□ 1.01
SMC2O95347 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMC2O95347 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SMC2O95347 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMC2O95347 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.37■■□□□ 1.01
SMC2O95347 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms