Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AL359736.2-201ENST00000621992 437 ntBASIC19.03■□□□□ 0.64
VAPBO95292 FAM197Y4-202ENST00000622692 608 ntBASIC19.03■□□□□ 0.64
VAPBO95292 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.03■□□□□ 0.64
VAPBO95292 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.03■□□□□ 0.64
VAPBO95292 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
VAPBO95292 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 Z98044.1-201ENST00000632503 1764 ntBASIC19.03■□□□□ 0.64
VAPBO95292 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
VAPBO95292 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
VAPBO95292 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
VAPBO95292 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.03■□□□□ 0.64
VAPBO95292 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
VAPBO95292 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VAPBO95292 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
VAPBO95292 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VAPBO95292 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.02■□□□□ 0.64
VAPBO95292 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VAPBO95292 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.02■□□□□ 0.64
VAPBO95292 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VAPBO95292 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.02■□□□□ 0.64
VAPBO95292 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.02■□□□□ 0.64
VAPBO95292 AL353807.1-201ENST00000427475 662 ntBASIC19.02■□□□□ 0.64
VAPBO95292 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
VAPBO95292 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.02■□□□□ 0.64
VAPBO95292 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VAPBO95292 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.02■□□□□ 0.64
VAPBO95292 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.02■□□□□ 0.64
VAPBO95292 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VAPBO95292 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VAPBO95292 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VAPBO95292 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.02■□□□□ 0.64
VAPBO95292 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VAPBO95292 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
VAPBO95292 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
VAPBO95292 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
VAPBO95292 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
VAPBO95292 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
VAPBO95292 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VAPBO95292 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VAPBO95292 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
VAPBO95292 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
VAPBO95292 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 KRT8P11-201ENST00000409686 1436 ntBASIC19.01■□□□□ 0.63
VAPBO95292 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.01■□□□□ 0.63
VAPBO95292 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.01■□□□□ 0.63
VAPBO95292 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.01■□□□□ 0.63
VAPBO95292 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
VAPBO95292 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.01■□□□□ 0.63
VAPBO95292 AF186192.3-201ENST00000583427 947 ntBASIC19.01■□□□□ 0.63
VAPBO95292 CR392000.1-201ENST00000624770 1228 ntBASIC19.01■□□□□ 0.63
VAPBO95292 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.01■□□□□ 0.63
VAPBO95292 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
VAPBO95292 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VAPBO95292 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19■□□□□ 0.63
VAPBO95292 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VAPBO95292 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19■□□□□ 0.63
VAPBO95292 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VAPBO95292 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19■□□□□ 0.63
VAPBO95292 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
VAPBO95292 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 AC104581.1-202ENST00000635932 2618 ntBASIC19■□□□□ 0.63
VAPBO95292 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
VAPBO95292 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
VAPBO95292 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19■□□□□ 0.63
VAPBO95292 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
VAPBO95292 RARRES2P10-201ENST00000564312 460 ntBASIC19■□□□□ 0.63
VAPBO95292 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19■□□□□ 0.63
VAPBO95292 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19■□□□□ 0.63
VAPBO95292 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
VAPBO95292 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19■□□□□ 0.63
VAPBO95292 AC083906.6-201ENST00000641366 219 ntBASIC19■□□□□ 0.63
VAPBO95292 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19■□□□□ 0.63
VAPBO95292 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms