Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AL512353.2-201ENST00000448759 1962 ntBASIC25.12■■□□□ 1.61
LTN1O94822 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LTN1O94822 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC25.12■■□□□ 1.61
LTN1O94822 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
LTN1O94822 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC25.12■■□□□ 1.61
LTN1O94822 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LTN1O94822 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC25.12■■□□□ 1.61
LTN1O94822 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTN1O94822 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC25.11■■□□□ 1.61
LTN1O94822 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC25.11■■□□□ 1.61
LTN1O94822 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LTN1O94822 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTN1O94822 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTN1O94822 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC25.11■■□□□ 1.61
LTN1O94822 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTN1O94822 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC25.11■■□□□ 1.61
LTN1O94822 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC25.11■■□□□ 1.61
LTN1O94822 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTN1O94822 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LTN1O94822 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTN1O94822 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTN1O94822 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTN1O94822 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTN1O94822 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC25.11■■□□□ 1.61
LTN1O94822 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC25.11■■□□□ 1.61
LTN1O94822 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC25.11■■□□□ 1.61
LTN1O94822 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LTN1O94822 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTN1O94822 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTN1O94822 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTN1O94822 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTN1O94822 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
LTN1O94822 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
LTN1O94822 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC25.1■■□□□ 1.61
LTN1O94822 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC25.1■■□□□ 1.61
LTN1O94822 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTN1O94822 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
LTN1O94822 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTN1O94822 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTN1O94822 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC25.1■■□□□ 1.61
LTN1O94822 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTN1O94822 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTN1O94822 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC25.1■■□□□ 1.61
LTN1O94822 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
LTN1O94822 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTN1O94822 PNN-202ENST00000553331 656 ntTSL 3 BASIC25.1■■□□□ 1.61
LTN1O94822 NAA38-203ENST00000575071 553 ntTSL 2 BASIC25.1■■□□□ 1.61
LTN1O94822 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTN1O94822 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTN1O94822 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LTN1O94822 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LTN1O94822 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC25.09■■□□□ 1.61
LTN1O94822 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LTN1O94822 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
LTN1O94822 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LTN1O94822 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
LTN1O94822 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LTN1O94822 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC25.09■■□□□ 1.61
LTN1O94822 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC25.09■■□□□ 1.61
LTN1O94822 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LTN1O94822 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LTN1O94822 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
LTN1O94822 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC25.09■■□□□ 1.61
LTN1O94822 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC25.09■■□□□ 1.61
LTN1O94822 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC25.09■■□□□ 1.61
LTN1O94822 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LTN1O94822 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC25.08■■□□□ 1.61
LTN1O94822 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LTN1O94822 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
LTN1O94822 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
LTN1O94822 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
LTN1O94822 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LTN1O94822 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LTN1O94822 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
LTN1O94822 LINC00265-3P-201ENST00000447588 903 ntBASIC25.08■■□□□ 1.61
LTN1O94822 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC25.08■■□□□ 1.61
LTN1O94822 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
LTN1O94822 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LTN1O94822 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
LTN1O94822 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LTN1O94822 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC25.08■■□□□ 1.61
LTN1O94822 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
LTN1O94822 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
LTN1O94822 KRT18P1-202ENST00000452408 1331 ntBASIC25.08■■□□□ 1.6
LTN1O94822 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC25.08■■□□□ 1.6
LTN1O94822 AL390719.2-201ENST00000606993 987 ntBASIC25.08■■□□□ 1.6
LTN1O94822 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC25.08■■□□□ 1.6
LTN1O94822 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC25.08■■□□□ 1.6
LTN1O94822 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
LTN1O94822 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LTN1O94822 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LTN1O94822 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
LTN1O94822 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC25.07■■□□□ 1.6
LTN1O94822 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LTN1O94822 BAALC-202ENST00000306391 243 ntTSL 5 BASIC25.07■■□□□ 1.6
LTN1O94822 BAALC-204ENST00000330955 222 ntTSL 5 BASIC25.07■■□□□ 1.6
LTN1O94822 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LTN1O94822 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LTN1O94822 SLC25A6P4-201ENST00000586535 553 ntBASIC25.07■■□□□ 1.6
LTN1O94822 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms