Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN11O75508 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CLDN11O75508 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN11O75508 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN11O75508 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN11O75508 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN11O75508 MCCD1P1-208ENST00000445732 328 ntBASIC19.34■□□□□ 0.69
CLDN11O75508 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN11O75508 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN11O75508 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN11O75508 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN11O75508 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CLDN11O75508 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN11O75508 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN11O75508 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN11O75508 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN11O75508 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN11O75508 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN11O75508 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN11O75508 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN11O75508 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN11O75508 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN11O75508 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.33■□□□□ 0.69
CLDN11O75508 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.33■□□□□ 0.69
CLDN11O75508 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CLDN11O75508 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.33■□□□□ 0.69
CLDN11O75508 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN11O75508 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.33■□□□□ 0.68
CLDN11O75508 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN11O75508 BX664615.1-201ENST00000443558 458 ntBASIC19.33■□□□□ 0.68
CLDN11O75508 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.33■□□□□ 0.68
CLDN11O75508 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
CLDN11O75508 WWOX-216ENST00000569818 525 ntBASIC19.33■□□□□ 0.68
CLDN11O75508 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.33■□□□□ 0.68
CLDN11O75508 AC141257.4-201ENST00000634557 245 ntBASIC19.33■□□□□ 0.68
CLDN11O75508 AC136944.6-201ENST00000634818 245 ntBASIC19.33■□□□□ 0.68
CLDN11O75508 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN11O75508 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CLDN11O75508 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CLDN11O75508 KRT8P32-201ENST00000512863 1461 ntBASIC19.33■□□□□ 0.68
CLDN11O75508 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN11O75508 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN11O75508 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN11O75508 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN11O75508 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CLDN11O75508 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLDN11O75508 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 CR769767.2-201ENST00000622735 460 ntBASIC19.32■□□□□ 0.68
CLDN11O75508 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN11O75508 AL109659.2-201ENST00000606809 1674 ntBASIC19.32■□□□□ 0.68
CLDN11O75508 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLDN11O75508 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN11O75508 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLDN11O75508 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN11O75508 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN11O75508 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN11O75508 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN11O75508 RCC2P3-201ENST00000418112 1537 ntBASIC19.31■□□□□ 0.68
CLDN11O75508 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN11O75508 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLDN11O75508 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN11O75508 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN11O75508 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN11O75508 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN11O75508 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.31■□□□□ 0.68
CLDN11O75508 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CLDN11O75508 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN11O75508 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLDN11O75508 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN11O75508 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN11O75508 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN11O75508 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLDN11O75508 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN11O75508 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN11O75508 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN11O75508 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN11O75508 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN11O75508 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN11O75508 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLDN11O75508 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN11O75508 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLDN11O75508 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN11O75508 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN11O75508 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN11O75508 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN11O75508 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms