Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LGR5O75473 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LGR5O75473 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
LGR5O75473 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LGR5O75473 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.04■□□□□ 0.96
LGR5O75473 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LGR5O75473 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
LGR5O75473 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
LGR5O75473 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGR5O75473 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LGR5O75473 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.04■□□□□ 0.96
LGR5O75473 AC116407.4-201ENST00000623319 1061 ntBASIC21.04■□□□□ 0.96
LGR5O75473 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGR5O75473 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGR5O75473 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGR5O75473 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGR5O75473 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGR5O75473 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGR5O75473 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGR5O75473 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGR5O75473 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGR5O75473 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.04■□□□□ 0.96
LGR5O75473 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.04■□□□□ 0.96
LGR5O75473 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.04■□□□□ 0.96
LGR5O75473 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LGR5O75473 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LGR5O75473 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.03■□□□□ 0.96
LGR5O75473 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LGR5O75473 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LGR5O75473 SPDYE15P-201ENST00000424157 909 ntBASIC21.03■□□□□ 0.96
LGR5O75473 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.03■□□□□ 0.96
LGR5O75473 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.03■□□□□ 0.96
LGR5O75473 IRX1P1-201ENST00000438849 1838 ntBASIC21.03■□□□□ 0.96
LGR5O75473 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.03■□□□□ 0.96
LGR5O75473 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.03■□□□□ 0.96
LGR5O75473 AC141586.3-201ENST00000562166 1838 ntBASIC21.03■□□□□ 0.96
LGR5O75473 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.03■□□□□ 0.96
LGR5O75473 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.03■□□□□ 0.96
LGR5O75473 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.03■□□□□ 0.96
LGR5O75473 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LGR5O75473 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
LGR5O75473 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LGR5O75473 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.02■□□□□ 0.96
LGR5O75473 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LGR5O75473 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
LGR5O75473 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.02■□□□□ 0.96
LGR5O75473 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.02■□□□□ 0.96
LGR5O75473 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.02■□□□□ 0.96
LGR5O75473 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.02■□□□□ 0.96
LGR5O75473 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
LGR5O75473 AL512353.2-201ENST00000448759 1962 ntBASIC21.02■□□□□ 0.96
LGR5O75473 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
LGR5O75473 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.02■□□□□ 0.96
LGR5O75473 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LGR5O75473 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
LGR5O75473 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LGR5O75473 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LGR5O75473 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
LGR5O75473 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGR5O75473 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGR5O75473 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGR5O75473 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGR5O75473 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGR5O75473 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGR5O75473 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LGR5O75473 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGR5O75473 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.01■□□□□ 0.95
LGR5O75473 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGR5O75473 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.01■□□□□ 0.95
LGR5O75473 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.01■□□□□ 0.95
LGR5O75473 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LGR5O75473 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.01■□□□□ 0.95
LGR5O75473 AC112907.2-201ENST00000448639 330 ntBASIC21.01■□□□□ 0.95
LGR5O75473 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LGR5O75473 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.01■□□□□ 0.95
LGR5O75473 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LGR5O75473 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGR5O75473 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.01■□□□□ 0.95
LGR5O75473 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.01■□□□□ 0.95
LGR5O75473 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGR5O75473 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.01■□□□□ 0.95
LGR5O75473 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21■□□□□ 0.95
LGR5O75473 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LGR5O75473 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LGR5O75473 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LGR5O75473 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21■□□□□ 0.95
LGR5O75473 AL109659.2-201ENST00000606809 1674 ntBASIC21■□□□□ 0.95
LGR5O75473 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LGR5O75473 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21■□□□□ 0.95
LGR5O75473 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LGR5O75473 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21■□□□□ 0.95
LGR5O75473 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LGR5O75473 DUSP5P1-201ENST00000441325 1139 ntBASIC21■□□□□ 0.95
LGR5O75473 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21■□□□□ 0.95
LGR5O75473 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21■□□□□ 0.95
LGR5O75473 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21■□□□□ 0.95
LGR5O75473 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21■□□□□ 0.95
LGR5O75473 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21■□□□□ 0.95
LGR5O75473 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21■□□□□ 0.95
LGR5O75473 AC083849.1-201ENST00000615227 514 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms