Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC8.45□□□□□ -1.06
USH2AO75445 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC8.45□□□□□ -1.06
USH2AO75445 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
USH2AO75445 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
USH2AO75445 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
USH2AO75445 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC8.45□□□□□ -1.06
USH2AO75445 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC8.45□□□□□ -1.06
USH2AO75445 AC023274.1-201ENST00000418278 595 ntBASIC8.45□□□□□ -1.06
USH2AO75445 AL591424.1-201ENST00000442569 1213 ntBASIC8.45□□□□□ -1.06
USH2AO75445 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC8.45□□□□□ -1.06
USH2AO75445 RPL28-205ENST00000558131 444 ntTSL 5 BASIC8.45□□□□□ -1.06
USH2AO75445 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC8.45□□□□□ -1.06
USH2AO75445 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC8.45□□□□□ -1.06
USH2AO75445 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
USH2AO75445 GALC-202ENST00000393568 2054 ntTSL 2 BASIC8.45□□□□□ -1.06
USH2AO75445 HIST2H3DP1-201ENST00000401004 416 ntBASIC8.45□□□□□ -1.06
USH2AO75445 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC8.45□□□□□ -1.06
USH2AO75445 AC008608.2-201ENST00000606089 416 ntBASIC8.45□□□□□ -1.06
USH2AO75445 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 PLK5-205ENST00000642079 1969 ntBASIC8.45□□□□□ -1.06
USH2AO75445 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
USH2AO75445 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC8.44□□□□□ -1.06
USH2AO75445 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
USH2AO75445 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
USH2AO75445 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC8.44□□□□□ -1.06
USH2AO75445 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC8.44□□□□□ -1.06
USH2AO75445 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
USH2AO75445 AC009947.1-201ENST00000444350 727 ntBASIC8.44□□□□□ -1.06
USH2AO75445 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
USH2AO75445 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC8.44□□□□□ -1.06
USH2AO75445 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC8.44□□□□□ -1.06
USH2AO75445 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC8.44□□□□□ -1.06
USH2AO75445 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC8.44□□□□□ -1.06
USH2AO75445 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC8.44□□□□□ -1.06
USH2AO75445 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
USH2AO75445 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC8.44□□□□□ -1.06
USH2AO75445 AC022494.1-201ENST00000466044 728 ntBASIC8.44□□□□□ -1.06
USH2AO75445 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC8.44□□□□□ -1.06
USH2AO75445 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC8.44□□□□□ -1.06
USH2AO75445 COPE-202ENST00000349893 948 ntTSL 2 BASIC8.44□□□□□ -1.06
USH2AO75445 BEX3-201ENST00000361298 921 ntTSL 2 BASIC8.44□□□□□ -1.06
USH2AO75445 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
USH2AO75445 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC8.44□□□□□ -1.06
USH2AO75445 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC8.44□□□□□ -1.06
USH2AO75445 AL391422.3-201ENST00000603791 2761 ntBASIC8.44□□□□□ -1.06
USH2AO75445 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
USH2AO75445 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC8.43□□□□□ -1.06
USH2AO75445 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 CRCP-205ENST00000431089 942 ntTSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 GRAMD4P1-201ENST00000435181 1110 ntBASIC8.43□□□□□ -1.06
USH2AO75445 AC096582.2-201ENST00000510860 516 ntBASIC8.43□□□□□ -1.06
USH2AO75445 RBM7-207ENST00000544582 692 ntTSL 3 BASIC8.43□□□□□ -1.06
USH2AO75445 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC8.43□□□□□ -1.06
USH2AO75445 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
USH2AO75445 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC8.43□□□□□ -1.06
USH2AO75445 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms