Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM13O60858 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM13O60858 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM13O60858 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRIM13O60858 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM13O60858 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM13O60858 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
TRIM13O60858 NOC2LP2-201ENST00000407594 1944 ntBASIC18.65■□□□□ 0.58
TRIM13O60858 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM13O60858 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM13O60858 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM13O60858 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM13O60858 AC008687.6-201ENST00000596318 630 ntBASIC18.65■□□□□ 0.58
TRIM13O60858 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM13O60858 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM13O60858 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM13O60858 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM13O60858 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM13O60858 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRIM13O60858 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM13O60858 AC073592.3-201ENST00000625118 1834 ntBASIC18.65■□□□□ 0.58
TRIM13O60858 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM13O60858 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM13O60858 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM13O60858 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM13O60858 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM13O60858 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM13O60858 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM13O60858 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
TRIM13O60858 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM13O60858 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM13O60858 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM13O60858 TSPY6P-201ENST00000448518 926 ntBASIC18.64■□□□□ 0.57
TRIM13O60858 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 ABALON-201ENST00000629058 1903 ntBASIC18.64■□□□□ 0.57
TRIM13O60858 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM13O60858 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
TRIM13O60858 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRIM13O60858 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM13O60858 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM13O60858 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM13O60858 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRIM13O60858 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM13O60858 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM13O60858 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM13O60858 AL160286.2-201ENST00000567150 934 ntBASIC18.63■□□□□ 0.57
TRIM13O60858 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM13O60858 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRIM13O60858 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM13O60858 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRIM13O60858 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM13O60858 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
TRIM13O60858 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM13O60858 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM13O60858 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM13O60858 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIM13O60858 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM13O60858 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM13O60858 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM13O60858 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM13O60858 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM13O60858 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM13O60858 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM13O60858 TSPY23P-201ENST00000440136 739 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms