Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF11O60813 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF11O60813 BX323043.1-201ENST00000641006 1765 ntBASIC19.21■□□□□ 0.67
PRAMEF11O60813 AC006333.2-201ENST00000607957 2099 ntBASIC19.21■□□□□ 0.67
PRAMEF11O60813 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF11O60813 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.21■□□□□ 0.67
PRAMEF11O60813 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF11O60813 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEF11O60813 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF11O60813 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF11O60813 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF11O60813 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF11O60813 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF11O60813 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF11O60813 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PRAMEF11O60813 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF11O60813 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF11O60813 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF11O60813 AL023284.2-201ENST00000405850 579 ntBASIC19.21■□□□□ 0.67
PRAMEF11O60813 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEF11O60813 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PRAMEF11O60813 AC083906.6-201ENST00000641366 219 ntBASIC19.21■□□□□ 0.67
PRAMEF11O60813 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.21■□□□□ 0.67
PRAMEF11O60813 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.21■□□□□ 0.67
PRAMEF11O60813 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEF11O60813 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEF11O60813 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEF11O60813 GPAT2P1-201ENST00000444924 1672 ntBASIC19.2■□□□□ 0.66
PRAMEF11O60813 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 AC018445.3-201ENST00000624177 1945 ntBASIC19.2■□□□□ 0.66
PRAMEF11O60813 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 AC068587.9-201ENST00000641814 219 ntBASIC19.2■□□□□ 0.66
PRAMEF11O60813 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 RCC2P3-201ENST00000418112 1537 ntBASIC19.2■□□□□ 0.66
PRAMEF11O60813 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PRAMEF11O60813 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF11O60813 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.19■□□□□ 0.66
PRAMEF11O60813 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF11O60813 AP000974.1-201ENST00000623909 2387 ntBASIC19.19■□□□□ 0.66
PRAMEF11O60813 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PRAMEF11O60813 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF11O60813 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF11O60813 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.19■□□□□ 0.66
PRAMEF11O60813 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.19■□□□□ 0.66
PRAMEF11O60813 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.19■□□□□ 0.66
PRAMEF11O60813 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF11O60813 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PRAMEF11O60813 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.19■□□□□ 0.66
PRAMEF11O60813 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEF11O60813 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF11O60813 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PRAMEF11O60813 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF11O60813 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF11O60813 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PRAMEF11O60813 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF11O60813 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF11O60813 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF11O60813 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.18■□□□□ 0.66
PRAMEF11O60813 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.18■□□□□ 0.66
PRAMEF11O60813 LINC01023-201ENST00000606054 436 ntBASIC19.18■□□□□ 0.66
PRAMEF11O60813 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
PRAMEF11O60813 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.18■□□□□ 0.66
PRAMEF11O60813 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PRAMEF11O60813 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF11O60813 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF11O60813 HEIH-201ENST00000623091 1652 ntBASIC19.17■□□□□ 0.66
PRAMEF11O60813 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF11O60813 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.17■□□□□ 0.66
PRAMEF11O60813 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PRAMEF11O60813 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.17■□□□□ 0.66
PRAMEF11O60813 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF11O60813 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF11O60813 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms