Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.34■□□□□ 0.69
SYNCRIPO60506 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNCRIPO60506 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNCRIPO60506 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SYNCRIPO60506 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNCRIPO60506 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
SYNCRIPO60506 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.33■□□□□ 0.69
SYNCRIPO60506 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
SYNCRIPO60506 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SYNCRIPO60506 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.33■□□□□ 0.69
SYNCRIPO60506 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNCRIPO60506 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.33■□□□□ 0.68
SYNCRIPO60506 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCRIPO60506 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCRIPO60506 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCRIPO60506 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCRIPO60506 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.33■□□□□ 0.68
SYNCRIPO60506 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCRIPO60506 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCRIPO60506 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SYNCRIPO60506 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCRIPO60506 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCRIPO60506 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCRIPO60506 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCRIPO60506 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SYNCRIPO60506 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCRIPO60506 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCRIPO60506 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCRIPO60506 AC104417.2-201ENST00000562989 1793 ntBASIC19.32■□□□□ 0.68
SYNCRIPO60506 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCRIPO60506 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCRIPO60506 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCRIPO60506 ZNF815P-204ENST00000434898 1737 ntBASIC19.32■□□□□ 0.68
SYNCRIPO60506 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCRIPO60506 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCRIPO60506 AP000523.1-201ENST00000398242 1049 ntBASIC19.32■□□□□ 0.68
SYNCRIPO60506 HOMER2P1-201ENST00000455653 964 ntBASIC19.32■□□□□ 0.68
SYNCRIPO60506 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 AC091076.1-201ENST00000610741 619 ntBASIC19.32■□□□□ 0.68
SYNCRIPO60506 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCRIPO60506 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCRIPO60506 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCRIPO60506 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNCRIPO60506 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.31■□□□□ 0.68
SYNCRIPO60506 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.31■□□□□ 0.68
SYNCRIPO60506 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.31■□□□□ 0.68
SYNCRIPO60506 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SYNCRIPO60506 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.31■□□□□ 0.68
SYNCRIPO60506 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.31■□□□□ 0.68
SYNCRIPO60506 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.31■□□□□ 0.68
SYNCRIPO60506 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.31■□□□□ 0.68
SYNCRIPO60506 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SYNCRIPO60506 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 KRT8P45-201ENST00000414328 1447 ntBASIC19.31■□□□□ 0.68
SYNCRIPO60506 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCRIPO60506 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SYNCRIPO60506 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCRIPO60506 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.3■□□□□ 0.68
SYNCRIPO60506 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms