Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VEGFDO43915 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
VEGFDO43915 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.57■□□□□ 0.56
VEGFDO43915 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VEGFDO43915 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VEGFDO43915 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VEGFDO43915 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VEGFDO43915 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.57■□□□□ 0.56
VEGFDO43915 MCCD1P1-208ENST00000445732 328 ntBASIC18.57■□□□□ 0.56
VEGFDO43915 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.57■□□□□ 0.56
VEGFDO43915 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.57■□□□□ 0.56
VEGFDO43915 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
VEGFDO43915 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.57■□□□□ 0.56
VEGFDO43915 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VEGFDO43915 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
VEGFDO43915 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VEGFDO43915 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.57■□□□□ 0.56
VEGFDO43915 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.57■□□□□ 0.56
VEGFDO43915 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
VEGFDO43915 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VEGFDO43915 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
VEGFDO43915 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VEGFDO43915 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.56■□□□□ 0.56
VEGFDO43915 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
VEGFDO43915 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VEGFDO43915 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VEGFDO43915 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.56■□□□□ 0.56
VEGFDO43915 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.56■□□□□ 0.56
VEGFDO43915 WWOX-216ENST00000569818 525 ntBASIC18.56■□□□□ 0.56
VEGFDO43915 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.56■□□□□ 0.56
VEGFDO43915 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VEGFDO43915 AL138966.2-201ENST00000621997 464 ntBASIC18.56■□□□□ 0.56
VEGFDO43915 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VEGFDO43915 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.56■□□□□ 0.56
VEGFDO43915 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
VEGFDO43915 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
VEGFDO43915 AL109659.2-201ENST00000606809 1674 ntBASIC18.56■□□□□ 0.56
VEGFDO43915 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VEGFDO43915 KRT8P45-201ENST00000414328 1447 ntBASIC18.56■□□□□ 0.56
VEGFDO43915 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.56■□□□□ 0.56
VEGFDO43915 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
VEGFDO43915 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VEGFDO43915 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.55■□□□□ 0.56
VEGFDO43915 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VEGFDO43915 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VEGFDO43915 RCC2P3-201ENST00000418112 1537 ntBASIC18.55■□□□□ 0.56
VEGFDO43915 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.55■□□□□ 0.56
VEGFDO43915 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VEGFDO43915 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VEGFDO43915 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.55■□□□□ 0.56
VEGFDO43915 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VEGFDO43915 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.55■□□□□ 0.56
VEGFDO43915 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
VEGFDO43915 KRT18P21-201ENST00000515767 1272 ntBASIC18.55■□□□□ 0.56
VEGFDO43915 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.55■□□□□ 0.56
VEGFDO43915 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.55■□□□□ 0.56
VEGFDO43915 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VEGFDO43915 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VEGFDO43915 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VEGFDO43915 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.55■□□□□ 0.56
VEGFDO43915 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.55■□□□□ 0.56
VEGFDO43915 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.55■□□□□ 0.56
VEGFDO43915 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VEGFDO43915 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VEGFDO43915 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VEGFDO43915 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VEGFDO43915 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VEGFDO43915 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VEGFDO43915 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VEGFDO43915 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VEGFDO43915 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VEGFDO43915 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VEGFDO43915 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VEGFDO43915 BX664615.1-201ENST00000443558 458 ntBASIC18.54■□□□□ 0.56
VEGFDO43915 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VEGFDO43915 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.54■□□□□ 0.56
VEGFDO43915 MIR3180-5-201ENST00000583743 153 ntBASIC18.54■□□□□ 0.56
VEGFDO43915 CR769767.2-201ENST00000622735 460 ntBASIC18.54■□□□□ 0.56
VEGFDO43915 AC141257.4-201ENST00000634557 245 ntBASIC18.54■□□□□ 0.56
VEGFDO43915 AC136944.6-201ENST00000634818 245 ntBASIC18.54■□□□□ 0.56
VEGFDO43915 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VEGFDO43915 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.54■□□□□ 0.56
VEGFDO43915 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.54■□□□□ 0.56
VEGFDO43915 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VEGFDO43915 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VEGFDO43915 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.54■□□□□ 0.56
VEGFDO43915 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VEGFDO43915 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VEGFDO43915 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
VEGFDO43915 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.53■□□□□ 0.56
VEGFDO43915 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VEGFDO43915 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
VEGFDO43915 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.53■□□□□ 0.56
VEGFDO43915 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VEGFDO43915 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VEGFDO43915 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VEGFDO43915 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VEGFDO43915 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VEGFDO43915 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VEGFDO43915 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms