Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.18■□□□□ 0.5
PRICKLE3O43900 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRICKLE3O43900 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRICKLE3O43900 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRICKLE3O43900 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
PRICKLE3O43900 GPAT2P1-201ENST00000444924 1672 ntBASIC18.18■□□□□ 0.5
PRICKLE3O43900 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRICKLE3O43900 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.18■□□□□ 0.5
PRICKLE3O43900 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PRICKLE3O43900 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PRICKLE3O43900 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRICKLE3O43900 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
PRICKLE3O43900 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRICKLE3O43900 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.17■□□□□ 0.5
PRICKLE3O43900 AC073508.3-201ENST00000619697 1419 ntBASIC18.17■□□□□ 0.5
PRICKLE3O43900 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRICKLE3O43900 AL023284.2-201ENST00000405850 579 ntBASIC18.17■□□□□ 0.5
PRICKLE3O43900 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.17■□□□□ 0.5
PRICKLE3O43900 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRICKLE3O43900 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRICKLE3O43900 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.17■□□□□ 0.5
PRICKLE3O43900 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.17■□□□□ 0.5
PRICKLE3O43900 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.17■□□□□ 0.5
PRICKLE3O43900 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
PRICKLE3O43900 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.17■□□□□ 0.5
PRICKLE3O43900 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRICKLE3O43900 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRICKLE3O43900 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRICKLE3O43900 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRICKLE3O43900 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRICKLE3O43900 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.17■□□□□ 0.5
PRICKLE3O43900 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRICKLE3O43900 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRICKLE3O43900 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.16■□□□□ 0.5
PRICKLE3O43900 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRICKLE3O43900 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PRICKLE3O43900 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRICKLE3O43900 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.16■□□□□ 0.5
PRICKLE3O43900 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRICKLE3O43900 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRICKLE3O43900 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
PRICKLE3O43900 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRICKLE3O43900 KRT18P21-201ENST00000515767 1272 ntBASIC18.16■□□□□ 0.5
PRICKLE3O43900 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.16■□□□□ 0.5
PRICKLE3O43900 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRICKLE3O43900 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.16■□□□□ 0.5
PRICKLE3O43900 AC005363.2-201ENST00000618631 242 ntBASIC18.16■□□□□ 0.5
PRICKLE3O43900 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PRICKLE3O43900 AC068587.9-201ENST00000641814 219 ntBASIC18.16■□□□□ 0.5
PRICKLE3O43900 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.16■□□□□ 0.5
PRICKLE3O43900 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRICKLE3O43900 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRICKLE3O43900 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRICKLE3O43900 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PRICKLE3O43900 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRICKLE3O43900 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRICKLE3O43900 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRICKLE3O43900 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PRICKLE3O43900 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.15■□□□□ 0.5
PRICKLE3O43900 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.15■□□□□ 0.5
PRICKLE3O43900 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRICKLE3O43900 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRICKLE3O43900 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.15■□□□□ 0.5
PRICKLE3O43900 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRICKLE3O43900 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRICKLE3O43900 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRICKLE3O43900 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRICKLE3O43900 AC113347.1-201ENST00000413321 391 ntBASIC18.15■□□□□ 0.5
PRICKLE3O43900 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PRICKLE3O43900 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
PRICKLE3O43900 AC010203.1-204ENST00000548782 407 ntBASIC18.15■□□□□ 0.5
PRICKLE3O43900 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.15■□□□□ 0.5
PRICKLE3O43900 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.15■□□□□ 0.5
PRICKLE3O43900 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRICKLE3O43900 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRICKLE3O43900 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRICKLE3O43900 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.15■□□□□ 0.5
PRICKLE3O43900 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRICKLE3O43900 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.15■□□□□ 0.5
PRICKLE3O43900 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PRICKLE3O43900 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRICKLE3O43900 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PRICKLE3O43900 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRICKLE3O43900 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.14■□□□□ 0.5
PRICKLE3O43900 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRICKLE3O43900 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRICKLE3O43900 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PRICKLE3O43900 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRICKLE3O43900 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRICKLE3O43900 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.14■□□□□ 0.49
PRICKLE3O43900 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRICKLE3O43900 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.49
PRICKLE3O43900 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.14■□□□□ 0.49
PRICKLE3O43900 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.14■□□□□ 0.49
PRICKLE3O43900 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PRICKLE3O43900 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRICKLE3O43900 AL138966.2-201ENST00000621997 464 ntBASIC18.14■□□□□ 0.49
PRICKLE3O43900 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRICKLE3O43900 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRICKLE3O43900 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms