Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.75■□□□□ 0.75
CREB3O43889 FP475955.4-201ENST00000623131 1990 ntBASIC19.75■□□□□ 0.75
CREB3O43889 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CREB3O43889 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CREB3O43889 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CREB3O43889 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CREB3O43889 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CREB3O43889 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CREB3O43889 KRT8P11-201ENST00000409686 1436 ntBASIC19.75■□□□□ 0.75
CREB3O43889 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CREB3O43889 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CREB3O43889 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.74■□□□□ 0.75
CREB3O43889 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.74■□□□□ 0.75
CREB3O43889 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.74■□□□□ 0.75
CREB3O43889 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.74■□□□□ 0.75
CREB3O43889 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CREB3O43889 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CREB3O43889 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CREB3O43889 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CREB3O43889 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.74■□□□□ 0.75
CREB3O43889 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 MESTP1-201ENST00000404287 994 ntBASIC19.74■□□□□ 0.75
CREB3O43889 FAM207BP-201ENST00000447172 505 ntBASIC19.74■□□□□ 0.75
CREB3O43889 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.74■□□□□ 0.75
CREB3O43889 AC093827.2-201ENST00000512654 315 ntBASIC19.74■□□□□ 0.75
CREB3O43889 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.74■□□□□ 0.75
CREB3O43889 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.74■□□□□ 0.75
CREB3O43889 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.74■□□□□ 0.75
CREB3O43889 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
CREB3O43889 AC066615.1-201ENST00000640911 628 ntBASIC19.74■□□□□ 0.75
CREB3O43889 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.74■□□□□ 0.75
CREB3O43889 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CREB3O43889 FEM1AP3-201ENST00000403722 1741 ntBASIC19.73■□□□□ 0.75
CREB3O43889 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.73■□□□□ 0.75
CREB3O43889 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CREB3O43889 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.73■□□□□ 0.75
CREB3O43889 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.73■□□□□ 0.75
CREB3O43889 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.73■□□□□ 0.75
CREB3O43889 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.73■□□□□ 0.75
CREB3O43889 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.73■□□□□ 0.75
CREB3O43889 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
CREB3O43889 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CREB3O43889 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CREB3O43889 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CREB3O43889 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.73■□□□□ 0.75
CREB3O43889 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CREB3O43889 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CREB3O43889 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CREB3O43889 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.72■□□□□ 0.75
CREB3O43889 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CREB3O43889 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CREB3O43889 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CREB3O43889 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CREB3O43889 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CREB3O43889 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CREB3O43889 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.72■□□□□ 0.75
CREB3O43889 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CREB3O43889 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
CREB3O43889 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CREB3O43889 AC116562.2-201ENST00000507042 360 ntBASIC19.72■□□□□ 0.75
CREB3O43889 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.72■□□□□ 0.75
CREB3O43889 AP003071.4-201ENST00000562276 1284 ntBASIC19.72■□□□□ 0.75
CREB3O43889 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.72■□□□□ 0.75
CREB3O43889 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CREB3O43889 REXO1L10P-201ENST00000615707 1290 ntBASIC19.72■□□□□ 0.75
CREB3O43889 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.72■□□□□ 0.75
CREB3O43889 REXO1L12P-201ENST00000622156 912 ntBASIC19.72■□□□□ 0.75
CREB3O43889 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CREB3O43889 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CREB3O43889 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CREB3O43889 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.72■□□□□ 0.75
CREB3O43889 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms