Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UPK2O00526 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.2■□□□□ 0.02
UPK2O00526 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.2■□□□□ 0.02
UPK2O00526 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.2■□□□□ 0.02
UPK2O00526 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.2■□□□□ 0.02
UPK2O00526 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.2■□□□□ 0.02
UPK2O00526 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
UPK2O00526 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.2■□□□□ 0.02
UPK2O00526 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 KRASP1-201ENST00000407852 552 ntBASIC15.2■□□□□ 0.02
UPK2O00526 AC239809.2-201ENST00000415381 517 ntBASIC15.2■□□□□ 0.02
UPK2O00526 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.2■□□□□ 0.02
UPK2O00526 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
UPK2O00526 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.2■□□□□ 0.02
UPK2O00526 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.2■□□□□ 0.02
UPK2O00526 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.2■□□□□ 0.02
UPK2O00526 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.2■□□□□ 0.02
UPK2O00526 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
UPK2O00526 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.2■□□□□ 0.02
UPK2O00526 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.2■□□□□ 0.02
UPK2O00526 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
UPK2O00526 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.2■□□□□ 0.02
UPK2O00526 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
UPK2O00526 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UPK2O00526 AC090340.1-201ENST00000620778 4980 ntBASIC15.19■□□□□ 0.02
UPK2O00526 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.19■□□□□ 0.02
UPK2O00526 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.19■□□□□ 0.02
UPK2O00526 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.19■□□□□ 0.02
UPK2O00526 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.19■□□□□ 0.02
UPK2O00526 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.19■□□□□ 0.02
UPK2O00526 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.19■□□□□ 0.02
UPK2O00526 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.19■□□□□ 0.02
UPK2O00526 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
UPK2O00526 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.19■□□□□ 0.02
UPK2O00526 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.19■□□□□ 0.02
UPK2O00526 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.19■□□□□ 0.02
UPK2O00526 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.19■□□□□ 0.02
UPK2O00526 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.19■□□□□ 0.02
UPK2O00526 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
UPK2O00526 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.19■□□□□ 0.02
UPK2O00526 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.19■□□□□ 0.02
UPK2O00526 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.19■□□□□ 0.02
UPK2O00526 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UPK2O00526 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
UPK2O00526 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UPK2O00526 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UPK2O00526 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
UPK2O00526 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.18■□□□□ 0.02
UPK2O00526 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.18■□□□□ 0.02
UPK2O00526 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK2O00526 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.18■□□□□ 0.02
UPK2O00526 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK2O00526 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK2O00526 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UPK2O00526 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
UPK2O00526 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
UPK2O00526 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
UPK2O00526 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK2O00526 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK2O00526 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK2O00526 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms