Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.97■□□□□ 0.47
UPK1AO00322 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1AO00322 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
UPK1AO00322 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
UPK1AO00322 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1AO00322 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.96■□□□□ 0.47
UPK1AO00322 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
UPK1AO00322 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
UPK1AO00322 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1AO00322 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1AO00322 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.96■□□□□ 0.47
UPK1AO00322 LTB4R2-202ENST00000528054 3092 ntBASIC17.96■□□□□ 0.47
UPK1AO00322 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1AO00322 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.96■□□□□ 0.47
UPK1AO00322 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1AO00322 PRORSD1P-201ENST00000295112 541 ntBASIC17.96■□□□□ 0.47
UPK1AO00322 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1AO00322 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1AO00322 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.96■□□□□ 0.47
UPK1AO00322 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.96■□□□□ 0.47
UPK1AO00322 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.96■□□□□ 0.47
UPK1AO00322 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
UPK1AO00322 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1AO00322 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.96■□□□□ 0.47
UPK1AO00322 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1AO00322 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1AO00322 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1AO00322 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1AO00322 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1AO00322 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
UPK1AO00322 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
UPK1AO00322 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
UPK1AO00322 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
UPK1AO00322 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.95■□□□□ 0.46
UPK1AO00322 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UPK1AO00322 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UPK1AO00322 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
UPK1AO00322 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.95■□□□□ 0.46
UPK1AO00322 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
UPK1AO00322 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.95■□□□□ 0.46
UPK1AO00322 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
UPK1AO00322 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
UPK1AO00322 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UPK1AO00322 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.95■□□□□ 0.46
UPK1AO00322 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.95■□□□□ 0.46
UPK1AO00322 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
UPK1AO00322 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 HTR7P1-201ENST00000538670 1336 ntBASIC17.95■□□□□ 0.46
UPK1AO00322 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.95■□□□□ 0.46
UPK1AO00322 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1AO00322 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.94■□□□□ 0.46
UPK1AO00322 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
UPK1AO00322 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
UPK1AO00322 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.94■□□□□ 0.46
UPK1AO00322 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.94■□□□□ 0.46
UPK1AO00322 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.94■□□□□ 0.46
UPK1AO00322 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
UPK1AO00322 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.94■□□□□ 0.46
UPK1AO00322 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.94■□□□□ 0.46
UPK1AO00322 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.94■□□□□ 0.46
UPK1AO00322 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1AO00322 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.93■□□□□ 0.46
UPK1AO00322 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
UPK1AO00322 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.93■□□□□ 0.46
UPK1AO00322 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.93■□□□□ 0.46
UPK1AO00322 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.93■□□□□ 0.46
UPK1AO00322 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1AO00322 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms