Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 KRT8P7-201ENST00000533003 1432 ntBASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 FP475955.4-201ENST00000623131 1990 ntBASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.65■□□□□ 0.26
MBD3L4A6NDZ8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.64■□□□□ 0.26
MBD3L4A6NDZ8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 KRT8P32-201ENST00000512863 1461 ntBASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.64■□□□□ 0.25
MBD3L4A6NDZ8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 AL158211.5-201ENST00000623583 2518 ntBASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 SPDYE13P-201ENST00000445314 798 ntBASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 AC008556.1-201ENST00000610908 2040 ntBASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD3L4A6NDZ8 HOXB1-202ENST00000577092 1414 ntBASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 AC069148.1-201ENST00000608741 768 ntBASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD3L4A6NDZ8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms