Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC28.01■■■□□ 2.08
HFM1A2PYH4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
HFM1A2PYH4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
HFM1A2PYH4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC28.01■■■□□ 2.08
HFM1A2PYH4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC28.01■■■□□ 2.08
HFM1A2PYH4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC28.01■■■□□ 2.07
HFM1A2PYH4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
HFM1A2PYH4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC28.01■■■□□ 2.07
HFM1A2PYH4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
HFM1A2PYH4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
HFM1A2PYH4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC28.01■■■□□ 2.07
HFM1A2PYH4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
HFM1A2PYH4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
HFM1A2PYH4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC28.01■■■□□ 2.07
HFM1A2PYH4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
HFM1A2PYH4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
HFM1A2PYH4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC28.01■■■□□ 2.07
HFM1A2PYH4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
HFM1A2PYH4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC28.01■■■□□ 2.07
HFM1A2PYH4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC28.01■■■□□ 2.07
HFM1A2PYH4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC28.01■■■□□ 2.07
HFM1A2PYH4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC28.01■■■□□ 2.07
HFM1A2PYH4 HYMAI.1-201ENST00000620949 238 ntBASIC28.01■■■□□ 2.07
HFM1A2PYH4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC28■■■□□ 2.07
HFM1A2PYH4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC28■■■□□ 2.07
HFM1A2PYH4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
HFM1A2PYH4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
HFM1A2PYH4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
HFM1A2PYH4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC28■■■□□ 2.07
HFM1A2PYH4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC28■■■□□ 2.07
HFM1A2PYH4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC28■■■□□ 2.07
HFM1A2PYH4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC28■■■□□ 2.07
HFM1A2PYH4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
HFM1A2PYH4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC28■■■□□ 2.07
HFM1A2PYH4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
HFM1A2PYH4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
HFM1A2PYH4 AL031133.1-201ENST00000406807 723 ntBASIC28■■■□□ 2.07
HFM1A2PYH4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC28■■■□□ 2.07
HFM1A2PYH4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC28■■■□□ 2.07
HFM1A2PYH4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC28■■■□□ 2.07
HFM1A2PYH4 LINC01238-205ENST00000567549 1107 ntBASIC28■■■□□ 2.07
HFM1A2PYH4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC28■■■□□ 2.07
HFM1A2PYH4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC28■■■□□ 2.07
HFM1A2PYH4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
HFM1A2PYH4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
HFM1A2PYH4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
HFM1A2PYH4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
HFM1A2PYH4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
HFM1A2PYH4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
HFM1A2PYH4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC27.99■■■□□ 2.07
HFM1A2PYH4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
HFM1A2PYH4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
HFM1A2PYH4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
HFM1A2PYH4 SPDYE13P-201ENST00000445314 798 ntBASIC27.99■■■□□ 2.07
HFM1A2PYH4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC27.99■■■□□ 2.07
HFM1A2PYH4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
HFM1A2PYH4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC27.99■■■□□ 2.07
HFM1A2PYH4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC27.99■■■□□ 2.07
HFM1A2PYH4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC27.99■■■□□ 2.07
HFM1A2PYH4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
HFM1A2PYH4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC27.99■■■□□ 2.07
HFM1A2PYH4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
HFM1A2PYH4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
HFM1A2PYH4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
HFM1A2PYH4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC27.98■■■□□ 2.07
HFM1A2PYH4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
HFM1A2PYH4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
HFM1A2PYH4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
HFM1A2PYH4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC27.98■■■□□ 2.07
HFM1A2PYH4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
HFM1A2PYH4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
HFM1A2PYH4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
HFM1A2PYH4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC27.98■■■□□ 2.07
HFM1A2PYH4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC27.98■■■□□ 2.07
HFM1A2PYH4 NFYC-AS1-201ENST00000606277 1687 ntBASIC27.98■■■□□ 2.07
HFM1A2PYH4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
HFM1A2PYH4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
HFM1A2PYH4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
HFM1A2PYH4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
HFM1A2PYH4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
HFM1A2PYH4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
HFM1A2PYH4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
HFM1A2PYH4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC27.97■■■□□ 2.07
HFM1A2PYH4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC27.97■■■□□ 2.07
HFM1A2PYH4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC27.97■■■□□ 2.07
HFM1A2PYH4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC27.97■■■□□ 2.07
HFM1A2PYH4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC27.97■■■□□ 2.07
HFM1A2PYH4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
HFM1A2PYH4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
HFM1A2PYH4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
HFM1A2PYH4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
HFM1A2PYH4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
HFM1A2PYH4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
HFM1A2PYH4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
HFM1A2PYH4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
HFM1A2PYH4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
HFM1A2PYH4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC27.96■■■□□ 2.07
HFM1A2PYH4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
HFM1A2PYH4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
HFM1A2PYH4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms